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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180025354
FTIP01000116
56360
Betaproteobacteria
CGA
Ser
>WENV180025359
FTIP01000254
198132
Betaproteobacteria
CAT
Met
>WENV180025360
FTIP01000283
56360
Betaproteobacteria
CGA
Ser
>WENV180025388
FTIP01000964
198132
Betaproteobacteria
CAT
Met
>WENV180025390
FTIP01001045
198132
Betaproteobacteria
CAT
Met
>WENV180025398
FTIP01001381
198132
Betaproteobacteria
CAT
Met
>WENV180025397
FTIP01001381
198132
Betaproteobacteria
CAT
Met
>WENV180025405
FTIP01001853
185257
Betaproteobacteria
CAT
Met
>WENV180025408
FTIP01001937
56360
Betaproteobacteria
CGA
Ser
>WENV180025409
FTIP01002038
185257
Betaproteobacteria
CAT
Met
>WENV180025413
FTIP01002250
185257
Betaproteobacteria
CAT
Met
>WENV180025418
FTIP01002532
414048
Betaproteobacteria
GGT
Thr
>WENV180025425
FTIP01003479
100103
Betaproteobacteria
GTA
Tyr
>WENV180025426
FTIP01003572
185257
Betaproteobacteria
CAT
Met
>WENV180025427
FTIP01003690
284981
Betaproteobacteria
GTT
Asn
>WENV180025432
FTIP01003968
185257
Betaproteobacteria
CAT
Met
>WENV180025433
FTIP01003994
284981
Betaproteobacteria
GTT
Asn
>WENV180025447
FTIP01005367
185257
Betaproteobacteria
CAT
Met
>WENV180025452
FTIP01005972
284981
Betaproteobacteria
GTT
Asn
>WENV180025456
FTIP01006606
56360
Betaproteobacteria
CGA
Ser
>WENV180025457
FTIP01006697
198132
Betaproteobacteria
CAT
Met
>WENV180025474
FTIP01012295
178096
Betaproteobacteria
TCT
Arg
>WENV180025480
FTIP01013410
118524
Betaproteobacteria
GTA
Tyr
>WENV180025486
FTIP01017759
56360
Betaproteobacteria
CGA
Ser
>WENV180025491
FTIP01021188
198132
Betaproteobacteria
CAT
Met
>WENV180025492
FTIP01021355
198132
Betaproteobacteria
CAT
Met
>WENV180025498
FTIP01023050
185257
Betaproteobacteria
CAT
Met
>WENV180025507
FTIP01027390
283940
Betaproteobacteria
TTC
Glu
>WENV180025510
FTIP01029201
284981
Betaproteobacteria
GTT
Asn
>WENV180025516
FTIP01029254
185257
Betaproteobacteria
CAT
Met
>WENV180025518
FTIP01030289
178139
Betaproteobacteria
GGG
Pro
>WENV180025527
FTIP01036633
56360
Betaproteobacteria
CGA
Ser
>WENV180025538
FTIP01045542
198132
Betaproteobacteria
CAT
Met
>WENV180025542
FTIP01046599
56360
Betaproteobacteria
CGA
Ser
>WENV180025544
FTIP01047324
185257
Betaproteobacteria
CAT
Met
>WENV180025547
FTIP01048776
198132
Betaproteobacteria
CAT
Met
>WENV180025548
FTIP01049653
56360
Betaproteobacteria
CGA
Ser
>WENV180025557
FTIP01058346
56360
Betaproteobacteria
CGA
Ser
>WENV180025558
FTIP01061047
290590
Betaproteobacteria
TAC
Val
>WENV180025560
FTIP01062099
56360
Betaproteobacteria
CGA
Ser
>WENV180025562
FTIP01065034
185257
Betaproteobacteria
CAT
Met
>WENV180025584
FTIP01093892
198132
Betaproteobacteria
CAT
Met
>WENV180025587
FTIP01095226
198132
Betaproteobacteria
CAT
Met
>WENV180025597
FTIP01101293
185257
Betaproteobacteria
CAT
Met
>WENV180025600
FTIP01104909
282942
Betaproteobacteria
CCG
Arg
>WENV180025601
FTIP01105562
56360
Betaproteobacteria
CGA
Ser
>WENV180025623
FTIP01161807
178141
Betaproteobacteria
CAT
Met
>WENV180025625
FTIP01168516
198132
Betaproteobacteria
CAT
Met
>WENV180025643
FTIP01234186
56360
Betaproteobacteria
CGA
Ser
>WENV180025650
FTIP01244943
56360
Betaproteobacteria
CGA
Ser
>WENV180025654
FTIP01253324
284981
Betaproteobacteria
GTT
Asn
>WENV180025657
FTIP01263364
290590
Betaproteobacteria
TAC
Val
>WENV180025671
FTIP01297012
100103
Betaproteobacteria
GTA
Tyr
>WENV180025679
FTIP01321146
56360
Betaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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