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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180029237
FTJI01250303
283095
Actinobacteria
TTC
Glu
>WENV180029251
FTJI01272618
480969
Actinobacteria
TCC
Gly
>WENV180029224
FTJI01223508
289404
Actinobacteria
TTT
Lys
>WENV180028958
FTJI01000157
400457
Actinobacteria
CTG
Gln
>WENV180029228
FTJI01231350
400457
Actinobacteria
CTG
Gln
>WENV180029252
FTJI01274424
400457
Actinobacteria
CTG
Gln
>WENV180029000
FTJI01001893
177969
Actinobacteria
CGG
Pro
>WENV180029179
FTJI01122378
177969
Actinobacteria
CGG
Pro
>WENV180029210
FTJI01188145
177969
Actinobacteria
CGG
Pro
>WENV180028959
FTJI01000231
490635
Actinobacteria
TCC
Gly
>WENV180029290
FTJI01414193
490635
Actinobacteria
TCC
Gly
>WENV180029329
FTJI01707388
490635
Actinobacteria
TCC
Gly
>WENV180028960
FTJI01000274
281661
Actinobacteria
TAC
Val
>WENV180029027
FTJI01005479
281661
Actinobacteria
TAC
Val
>WENV180029207
FTJI01181318
315977
Actinobacteria
CTT
Lys
>WENV180029300
FTJI01463382
315977
Actinobacteria
CTT
Lys
>WENV180029182
FTJI01124944
14656
Actinobacteria
GCT
Ser
>WENV180029101
FTJI01036417
56310
Actinobacteria
GGA
Ser
>WENV180029257
FTJI01289740
328866
Actinobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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