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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180030550
FTJN01000059
290590
Betaproteobacteria
TAC
Val
>WENV180030569
FTJN01000253
100103
Betaproteobacteria
GTA
Tyr
>WENV180030575
FTJN01000311
56360
Betaproteobacteria
CGA
Ser
>WENV180030588
FTJN01000580
198132
Betaproteobacteria
CAT
Met
>WENV180030730
FTJN01005366
333120
Betaproteobacteria
CCA
Trp
>WENV180030738
FTJN01008157
100103
Betaproteobacteria
GTA
Tyr
>WENV180030740
FTJN01008157
467771
Betaproteobacteria
GGT
Thr
>WENV180030749
FTJN01013412
299575
Betaproteobacteria
TGC
Ala
>WENV180030931
FTJN01535133
284297
Betaproteobacteria
TGT
Thr
>WENV180030948
FTJN01684519
284297
Betaproteobacteria
TGT
Thr
>WENV180030989
FTJN01929904
185257
Betaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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