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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180032847
FTKD01002117
178141
Betaproteobacteria
CAT
Met
>WENV180032983
FTKD01020914
185257
Betaproteobacteria
CAT
Met
>WENV180032998
FTKD01030331
185257
Betaproteobacteria
CAT
Met
>WENV180032716
FTKD01000071
198132
Betaproteobacteria
CAT
Met
>WENV180032782
FTKD01000836
198132
Betaproteobacteria
CAT
Met
>WENV180032923
FTKD01004889
198132
Betaproteobacteria
CAT
Met
>WENV180032815
FTKD01001348
333120
Betaproteobacteria
CCA
Trp
>WENV180032996
FTKD01029315
333120
Betaproteobacteria
CCA
Trp
>WENV180033109
FTKD01402781
401210
Betaproteobacteria
CCT
Arg
>WENV180032722
FTKD01000125
56360
Betaproteobacteria
CGA
Ser
>WENV180032728
FTKD01000141
56360
Betaproteobacteria
CGA
Ser
>WENV180032928
FTKD01009759
56360
Betaproteobacteria
CGA
Ser
>WENV180033121
FTKD01411761
176778
Betaproteobacteria
GAT
Ile
>WENV180032843
FTKD01001697
176778
Betaproteobacteria
GAT
Ile
>WENV180032704
FTKD01000020
176778
Betaproteobacteria
GAT
Ile
>WENV180032733
FTKD01000219
467771
Betaproteobacteria
GGT
Thr
>WENV180032731
FTKD01000219
100103
Betaproteobacteria
GTA
Tyr
>WENV180032717
FTKD01000078
290590
Betaproteobacteria
TAC
Val
>WENV180032817
FTKD01001454
290590
Betaproteobacteria
TAC
Val
>WENV180033037
FTKD01096408
290590
Betaproteobacteria
TAC
Val
>WENV180032876
FTKD01002429
499230
Betaproteobacteria
TCC
Gly
>WENV180032705
FTKD01000020
282862
Betaproteobacteria
TGC
Ala
>WENV180032844
FTKD01001697
282862
Betaproteobacteria
TGC
Ala
>WENV180033122
FTKD01411761
282862
Betaproteobacteria
TGC
Ala
>WENV180032985
FTKD01022022
299575
Betaproteobacteria
TGC
Ala
>WENV180032823
FTKD01001486
299575
Betaproteobacteria
TGC
Ala
>WENV180032707
FTKD01000022
316525
Betaproteobacteria
TGT
Thr
>WENV180033127
FTKD01411775
281681
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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