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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180033881
FTKM01000002
185321
Alphaproteobacteria
GAT
Ile
>WENV180033887
FTKM01000005
78800
Alphaproteobacteria
CAG
Leu
>WENV180033888
FTKM01000007
480946
Alphaproteobacteria
TTG
Gln
>WENV180033891
FTKM01000007
118550
Alphaproteobacteria
GAG
Leu
>WENV180033912
FTKM01000022
412163
Alphaproteobacteria
GGT
Thr
>WENV180033931
FTKM01001950
178197
Alphaproteobacteria
CAT
Met
>WENV180033933
FTKM01001950
200110
Alphaproteobacteria
ACG
Arg
>WENV180033940
FTKM01003996
185321
Alphaproteobacteria
GAT
Ile
>WENV180034013
FTKM01072074
402067
Alphaproteobacteria
GCC
Gly
>WENV180034071
FTKM01498003
482973
Alphaproteobacteria
TCC
Gly
>WENV180034110
FTKM01680085
399239
Alphaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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