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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180034079
FTKM01557460
208822
Betaproteobacteria
TTG
Gln
>WENV180034096
FTKM01678137
330401
Betaproteobacteria
GCC
Gly
>WENV180034074
FTKM01539955
290590
Betaproteobacteria
TAC
Val
>WENV180034104
FTKM01680079
20369
Betaproteobacteria
GGA
Ser
>WENV180033992
FTKM01037384
73409
Betaproteobacteria
CAG
Leu
>WENV180034108
FTKM01680081
400152
Betaproteobacteria
TCT
Arg
>WENV180034054
FTKM01304814
100103
Betaproteobacteria
GTA
Tyr
>WENV180034023
FTKM01102846
366114
Betaproteobacteria
TTT
Lys
>WENV180034008
FTKM01069185
180114
Betaproteobacteria
CAT
Met
>WENV180033950
FTKM01009329
225043
Betaproteobacteria
ACG
Arg
>WENV180033951
FTKM01009329
225043
Betaproteobacteria
ACG
Arg
>WENV180033919
FTKM01000866
455739
Betaproteobacteria
CCT
Arg
>WENV180034056
FTKM01304814
452715
Betaproteobacteria
GGT
Thr
>WENV180033993
FTKM01037384
95525
Betaproteobacteria
CAG
Leu
>WENV180033916
FTKM01000483
118114
Betaproteobacteria
CAA
Leu
>WENV180033949
FTKM01007993
118114
Betaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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