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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170609696
FUWD011470285
31263
Betaproteobacteria
CGA
Ser
>WENV170600032
FUWD010103553
212101
Betaproteobacteria
GAT
Ile
>WENV170600401
FUWD010123479
212101
Betaproteobacteria
GAT
Ile
>WENV170606007
FUWD010589685
212101
Betaproteobacteria
GAT
Ile
>WENV170624207
FUWD013177722
283940
Betaproteobacteria
TTC
Glu
>WENV170632490
FUWD013383411
283940
Betaproteobacteria
TTC
Glu
>WENV170600581
FUWD010133496
284938
Betaproteobacteria
TTT
Lys
>WENV170602744
FUWD010261413
284938
Betaproteobacteria
TTT
Lys
>WENV170616170
FUWD012880194
284938
Betaproteobacteria
TTT
Lys
>WENV170619649
FUWD013018524
284938
Betaproteobacteria
TTT
Lys
>WENV170624255
FUWD013178581
284938
Betaproteobacteria
TTT
Lys
>WENV170627757
FUWD013236974
284938
Betaproteobacteria
TTT
Lys
>WENV170632533
FUWD013384090
284938
Betaproteobacteria
TTT
Lys
>WENV170600061
FUWD010104591
481455
Betaproteobacteria
TCC
Gly
>WENV170617379
FUWD012923934
481455
Betaproteobacteria
TCC
Gly
>WENV170610155
FUWD011723004
118421
Betaproteobacteria
TAG
Leu
>WENV170598892
FUWD010053738
284940
Betaproteobacteria
GTG
His
>WENV170619780
FUWD013021137
284940
Betaproteobacteria
GTG
His
>WENV170627899
FUWD013239380
284940
Betaproteobacteria
GTG
His
>WENV170612874
FUWD012715508
197278
Betaproteobacteria
CAT
Met
>WENV170606755
FUWD010727143
284666
Betaproteobacteria
TAC
Val
>WENV170603977
FUWD010349419
281524
Betaproteobacteria
GAA
Phe
>WENV170617279
FUWD012920044
401210
Betaproteobacteria
CCT
Arg
>WENV170617278
FUWD012920043
401210
Betaproteobacteria
CCT
Arg
>WENV170599552
FUWD010079528
401210
Betaproteobacteria
CCT
Arg
>WENV170599277
FUWD010070307
401210
Betaproteobacteria
CCT
Arg
>WENV170621750
FUWD013071632
178141
Betaproteobacteria
CAT
Met
>WENV170629937
FUWD013287319
178141
Betaproteobacteria
CAT
Met
>WENV170599950
FUWD010099646
284934
Betaproteobacteria
TGT
Thr
>WENV170601171
FUWD010159467
284934
Betaproteobacteria
TGT
Thr
>WENV170618827
FUWD012988282
284934
Betaproteobacteria
TGT
Thr
>WENV170624192
FUWD013177321
284934
Betaproteobacteria
TGT
Thr
>WENV170632475
FUWD013383101
284934
Betaproteobacteria
TGT
Thr
>WENV170599115
FUWD010063368
481456
Betaproteobacteria
GCA
Cys
>WENV170619739
FUWD013020327
481456
Betaproteobacteria
GCA
Cys
>WENV170624446
FUWD013181810
481456
Betaproteobacteria
GCA
Cys
>WENV170624448
FUWD013181811
481456
Betaproteobacteria
GCA
Cys
>WENV170627860
FUWD013238633
481456
Betaproteobacteria
GCA
Cys
>WENV170632734
FUWD013386698
481456
Betaproteobacteria
GCA
Cys
>WENV170632736
FUWD013386699
481456
Betaproteobacteria
GCA
Cys
>WENV170622663
FUWD013115596
117923
Betaproteobacteria
CAG
Leu
>WENV170630877
FUWD013329399
117923
Betaproteobacteria
CAG
Leu
>WENV170599468
FUWD010075688
281431
Betaproteobacteria
GTT
Asn
>WENV170600647
FUWD010136360
281431
Betaproteobacteria
GTT
Asn
>WENV170617277
FUWD012920039
281431
Betaproteobacteria
GTT
Asn
>WENV170624900
FUWD013188592
281431
Betaproteobacteria
GTT
Asn
>WENV170624901
FUWD013188593
281431
Betaproteobacteria
GTT
Asn
>WENV170633162
FUWD013392324
281431
Betaproteobacteria
GTT
Asn
>WENV170633163
FUWD013392325
281431
Betaproteobacteria
GTT
Asn
>WENV170599730
FUWD010088955
180112
Betaproteobacteria
TGG
Pro
>WENV170617406
FUWD012925174
180112
Betaproteobacteria
TGG
Pro
>WENV170617408
FUWD012925175
180112
Betaproteobacteria
TGG
Pro
>WENV170619936
FUWD013023157
180112
Betaproteobacteria
TGG
Pro
>WENV170628059
FUWD013241254
180112
Betaproteobacteria
TGG
Pro
>WENV170606520
FUWD010677574
283006
Betaproteobacteria
GCC
Gly
>WENV170621737
FUWD013070889
283006
Betaproteobacteria
GCC
Gly
>WENV170629924
FUWD013286579
283006
Betaproteobacteria
GCC
Gly
>WENV170600405
FUWD010123546
284939
Betaproteobacteria
CCG
Arg
>WENV170604211
FUWD010373938
284939
Betaproteobacteria
CCG
Arg
>WENV170616668
FUWD012896418
284939
Betaproteobacteria
CCG
Arg
>WENV170624525
FUWD013182677
284939
Betaproteobacteria
CCG
Arg
>WENV170632811
FUWD013387393
284939
Betaproteobacteria
CCG
Arg
>WENV170629003
FUWD013258315
117806
Betaproteobacteria
GTA
Tyr
>WENV170620850
FUWD013041246
117806
Betaproteobacteria
GTA
Tyr
>WENV170598983
FUWD010057285
20574
Betaproteobacteria
GGA
Ser
>WENV170606211
FUWD010632019
20574
Betaproteobacteria
GGA
Ser
>WENV170624888
FUWD013188414
20574
Betaproteobacteria
GGA
Ser
>WENV170599746
FUWD010090193
29931
Betaproteobacteria
CGA
Ser
>WENV170624233
FUWD013178193
29931
Betaproteobacteria
CGA
Ser
>WENV170632515
FUWD013383781
29931
Betaproteobacteria
CGA
Ser
>WENV170601553
FUWD010179325
282942
Betaproteobacteria
CCG
Arg
>WENV170606274
FUWD010639701
282942
Betaproteobacteria
CCG
Arg
>WENV170620977
FUWD013044933
282942
Betaproteobacteria
CCG
Arg
>WENV170622681
FUWD013116520
282942
Betaproteobacteria
CCG
Arg
>WENV170625948
FUWD013210127
282942
Betaproteobacteria
CCG
Arg
>WENV170629134
FUWD013261847
282942
Betaproteobacteria
CCG
Arg
>WENV170630895
FUWD013330323
282942
Betaproteobacteria
CCG
Arg
>WENV170634162
FUWD013411585
282942
Betaproteobacteria
CCG
Arg
>WENV170622282
FUWD013095868
22115
Betaproteobacteria
CGA
Ser
>WENV170629851
FUWD013283702
22115
Betaproteobacteria
CGA
Ser
>WENV170632763
FUWD013387022
46896
Betaproteobacteria
TAA
Leu
>WENV170629489
FUWD013271637
46896
Betaproteobacteria
TAA
Leu
>WENV170624478
FUWD013182212
46896
Betaproteobacteria
TAA
Leu
>WENV170621312
FUWD013055203
46896
Betaproteobacteria
TAA
Leu
>WENV170620491
FUWD013032733
20399
Betaproteobacteria
GGA
Ser
>WENV170628635
FUWD013250185
20399
Betaproteobacteria
GGA
Ser
>WENV170617407
FUWD012925174
180113
Betaproteobacteria
TCT
Arg
>WENV170609360
FUWD011381853
180113
Betaproteobacteria
TCT
Arg
>WENV170599731
FUWD010088955
180113
Betaproteobacteria
TCT
Arg
>WENV170617409
FUWD012925175
180113
Betaproteobacteria
TCT
Arg
>WENV170626159
FUWD013215380
286629
Betaproteobacteria
CCA
Trp
>WENV170600437
FUWD010125363
286629
Betaproteobacteria
CCA
Trp
>WENV170602860
FUWD010270878
481266
Betaproteobacteria
GCA
Cys
>WENV170619730
FUWD013020172
283942
Betaproteobacteria
CCA
Trp
>WENV170627852
FUWD013238495
283942
Betaproteobacteria
CCA
Trp
>WENV170605466
FUWD010490128
400288
Betaproteobacteria
CCT
Arg
>WENV170625137
FUWD013192376
298213
Betaproteobacteria
TGT
Thr
>WENV170633393
FUWD013395544
298213
Betaproteobacteria
TGT
Thr
>WENV170616340
FUWD012885483
200194
Betaproteobacteria
TTG
Gln
>WENV170616254
FUWD012882640
284933
Betaproteobacteria
CCA
Trp
>WENV170609506
FUWD011423069
4045
Betaproteobacteria
GCT
Ser
>WENV170616291
FUWD012883323
4045
Betaproteobacteria
GCT
Ser
>WENV170619628
FUWD013018041
4045
Betaproteobacteria
GCT
Ser
>WENV170627734
FUWD013236518
4045
Betaproteobacteria
GCT
Ser
>WENV170599484
FUWD010076858
281308
Betaproteobacteria
GAT
Ile
>WENV170602791
FUWD010263900
292271
Betaproteobacteria
TGT
Thr
>WENV170602192
FUWD010220905
118799
Betaproteobacteria
GAG
Leu
>WENV170632855
FUWD013388090
180114
Betaproteobacteria
CAT
Met
>WENV170632854
FUWD013388089
180114
Betaproteobacteria
CAT
Met
>WENV170626064
FUWD013213062
180114
Betaproteobacteria
CAT
Met
>WENV170624572
FUWD013183539
180114
Betaproteobacteria
CAT
Met
>WENV170624571
FUWD013183538
180114
Betaproteobacteria
CAT
Met
>WENV170598950
FUWD010056165
180114
Betaproteobacteria
CAT
Met
>WENV170608239
FUWD010906778
225043
Betaproteobacteria
ACG
Arg
>WENV170609428
FUWD011395570
178499
Betaproteobacteria
TTG
Gln
>WENV170606036
FUWD010594687
229876
Betaproteobacteria
GGG
Pro
>WENV170616697
FUWD012899579
73885
Betaproteobacteria
CAG
Leu
>WENV170616790
FUWD012903087
73885
Betaproteobacteria
CAG
Leu
>WENV170613019
FUWD012773157
186768
Betaproteobacteria
>WENV170613018
FUWD012773157
186768
Betaproteobacteria
>WENV170606213
FUWD010632494
118529
Betaproteobacteria
CAA
Leu
>WENV170599469
FUWD010075699
29932
Betaproteobacteria
TGA
Ser
>WENV170600280
FUWD010117858
29932
Betaproteobacteria
TGA
Ser
>WENV170602775
FUWD010263201
29932
Betaproteobacteria
TGA
Ser
>WENV170617636
FUWD012932904
29932
Betaproteobacteria
TGA
Ser
>WENV170625301
FUWD013195595
29932
Betaproteobacteria
TGA
Ser
>WENV170633541
FUWD013398366
29932
Betaproteobacteria
TGA
Ser
>WENV170617378
FUWD012923934
118528
Betaproteobacteria
GTA
Tyr
>WENV170628322
FUWD013244821
340615
Betaproteobacteria
TGC
Ala
>WENV170620186
FUWD013027011
340615
Betaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK