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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170639315
JFJP01001851
283940
Betaproteobacteria
TTC
Glu
>WENV170639418
JFJP01002524
283937
Betaproteobacteria
GCC
Gly
>WENV170639432
JFJP01002658
283937
Betaproteobacteria
GCC
Gly
>WENV170639498
JFJP01003615
283937
Betaproteobacteria
GCC
Gly
>WENV170639508
JFJP01003807
283937
Betaproteobacteria
GCC
Gly
>WENV170639551
JFJP01004348
283937
Betaproteobacteria
GCC
Gly
>WENV170639553
JFJP01004348
283937
Betaproteobacteria
GCC
Gly
>WENV170642137
JFJP01039150
283937
Betaproteobacteria
GCC
Gly
>WENV170639640
JFJP01005546
284821
Betaproteobacteria
TTT
Lys
>WENV170639774
JFJP01007486
284821
Betaproteobacteria
TTT
Lys
>WENV170639852
JFJP01010144
284821
Betaproteobacteria
TTT
Lys
>WENV170639662
JFJP01005704
406663
Betaproteobacteria
CAC
Val
>WENV170639810
JFJP01008832
406663
Betaproteobacteria
CAC
Val
>WENV170639348
JFJP01001993
333120
Betaproteobacteria
CCA
Trp
>WENV170639430
JFJP01002632
281431
Betaproteobacteria
GTT
Asn
>WENV170639465
JFJP01003051
281431
Betaproteobacteria
GTT
Asn
>WENV170639507
JFJP01003807
281431
Betaproteobacteria
GTT
Asn
>WENV170639677
JFJP01005862
281431
Betaproteobacteria
GTT
Asn
>WENV170639808
JFJP01008699
281431
Betaproteobacteria
GTT
Asn
>WENV170639635
JFJP01005507
429429
Betaproteobacteria
CAC
Val
>WENV170639646
JFJP01005604
429429
Betaproteobacteria
CAC
Val
>WENV170639664
JFJP01005743
185257
Betaproteobacteria
CAT
Met
>WENV170639655
JFJP01005676
283006
Betaproteobacteria
GCC
Gly
>WENV170639812
JFJP01008835
283006
Betaproteobacteria
GCC
Gly
>WENV170639374
JFJP01002140
73416
Betaproteobacteria
TAG
Leu
>WENV170639399
JFJP01002384
400162
Betaproteobacteria
GGT
Thr
>WENV170639736
JFJP01006463
480973
Betaproteobacteria
GCA
Cys
>WENV170639650
JFJP01005635
111196
Betaproteobacteria
GTA
Tyr
>WENV170639864
JFJP01010519
111196
Betaproteobacteria
GTA
Tyr
>WENV170639767
JFJP01007322
483989
Betaproteobacteria
>WENV170639383
JFJP01002252
118123
Betaproteobacteria
CAG
Leu
>WENV170639747
JFJP01006774
282942
Betaproteobacteria
CCG
Arg
>WENV170639784
JFJP01007744
282942
Betaproteobacteria
CCG
Arg
>WENV170639786
JFJP01007788
282942
Betaproteobacteria
CCG
Arg
>WENV170639793
JFJP01008013
282942
Betaproteobacteria
CCG
Arg
>WENV170639839
JFJP01009616
282942
Betaproteobacteria
CCG
Arg
>WENV170639296
JFJP01001773
281681
Betaproteobacteria
TTT
Lys
>WENV170639552
JFJP01004348
504008
Betaproteobacteria
GCA
Cys
>WENV170639381
JFJP01002228
178981
Betaproteobacteria
CAT
Met
>WENV170639518
JFJP01003881
499230
Betaproteobacteria
TCC
Gly
>WENV170639398
JFJP01002384
499230
Betaproteobacteria
TCC
Gly
>WENV170639359
JFJP01002045
499230
Betaproteobacteria
TCC
Gly
>WENV170639324
JFJP01001899
282860
Betaproteobacteria
CCA
Trp
>WENV170639809
JFJP01008793
120253
Betaproteobacteria
CAG
Leu
>WENV170639595
JFJP01005298
120253
Betaproteobacteria
CAG
Leu
>WENV170639462
JFJP01003027
120253
Betaproteobacteria
CAG
Leu
>WENV170639378
JFJP01002159
284936
Betaproteobacteria
CGT
Thr
>WENV170639714
JFJP01006216
180485
Betaproteobacteria
CAT
Met
>WENV170639787
JFJP01007793
180485
Betaproteobacteria
CAT
Met
>WENV170639421
JFJP01002541
366114
Betaproteobacteria
TTT
Lys
>WENV170639579
JFJP01005014
184269
Betaproteobacteria
TTG
Gln
>WENV170639617
JFJP01005396
368643
Betaproteobacteria
GCC
Gly
>WENV170639681
JFJP01005872
368643
Betaproteobacteria
GCC
Gly
>WENV170639693
JFJP01005958
368643
Betaproteobacteria
GCC
Gly
>WENV170639694
JFJP01005958
368643
Betaproteobacteria
GCC
Gly
>WENV170639697
JFJP01005966
368643
Betaproteobacteria
GCC
Gly
>WENV170639700
JFJP01005985
368643
Betaproteobacteria
GCC
Gly
>WENV170639701
JFJP01005985
368643
Betaproteobacteria
GCC
Gly
>WENV170639723
JFJP01006294
368643
Betaproteobacteria
GCC
Gly
>WENV170639766
JFJP01007243
368643
Betaproteobacteria
GCC
Gly
>WENV170639805
JFJP01008645
368643
Betaproteobacteria
GCC
Gly
>WENV170639280
JFJP01001743
480929
Betaproteobacteria
GCA
Cys
>WENV170639608
JFJP01005316
178096
Betaproteobacteria
TCT
Arg
>WENV170639740
JFJP01006515
209542
Betaproteobacteria
CGG
Pro
>WENV170639842
JFJP01009677
211214
Betaproteobacteria
CAT
Met
>WENV170639788
JFJP01007890
187036
Betaproteobacteria
CAT
Met
>WENV170639751
JFJP01006829
187036
Betaproteobacteria
CAT
Met
>WENV170639311
JFJP01001838
289755
Betaproteobacteria
TAC
Val
>WENV170639352
JFJP01002028
504022
Betaproteobacteria
TCC
Gly
>WENV170639325
JFJP01001899
399347
Betaproteobacteria
CAC
Val
>WENV170639519
JFJP01003881
409406
Betaproteobacteria
GGT
Thr
>WENV170639506
JFJP01003807
409406
Betaproteobacteria
GGT
Thr
>WENV170639452
JFJP01002930
409406
Betaproteobacteria
GGT
Thr
>WENV170639353
JFJP01002028
409406
Betaproteobacteria
GGT
Thr
>WENV170642320
JFJP01040274
243244
Betaproteobacteria
TGG
Pro
>WENV170639621
JFJP01005409
235235
Betaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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