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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170641059
JFJP01033076
176064
Gammaproteobacteria
CAT
Met
>WENV170642779
JFJP01044571
302240
Gammaproteobacteria
GGC
Ala
>WENV170641939
JFJP01038268
292194
Gammaproteobacteria
GGT
Thr
>WENV170642955
JFJP01047339
292194
Gammaproteobacteria
GGT
Thr
>WENV170639797
JFJP01008127
176868
Gammaproteobacteria
CAT
Met
>WENV170640967
JFJP01031717
20379
Gammaproteobacteria
GCT
Ser
>WENV170641002
JFJP01032148
287558
Gammaproteobacteria
TTC
Glu
>WENV170641001
JFJP01032135
287558
Gammaproteobacteria
TTC
Glu
>WENV170641000
JFJP01032135
287558
Gammaproteobacteria
TTC
Glu
>WENV170640999
JFJP01032112
287558
Gammaproteobacteria
TTC
Glu
>WENV170640998
JFJP01032112
287558
Gammaproteobacteria
TTC
Glu
>WENV170641038
JFJP01032903
176068
Gammaproteobacteria
TGG
Pro
>WENV170639780
JFJP01007610
211156
Gammaproteobacteria
CGG
Pro
>WENV170640982
JFJP01031884
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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