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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170645910
JQGF01000505
236921
Betaproteobacteria
CAT
Met
>WENV170645931
JQGF01001149
283192
Betaproteobacteria
TGT
Thr
>WENV170646001
JQGF01005698
283192
Betaproteobacteria
TGT
Thr
>WENV170645924
JQGF01000740
283193
Betaproteobacteria
CCA
Trp
>WENV170646012
JQGF01006493
283193
Betaproteobacteria
CCA
Trp
>WENV170645976
JQGF01002816
283190
Betaproteobacteria
CGT
Thr
>WENV170645945
JQGF01001469
73476
Betaproteobacteria
GTA
Tyr
>WENV170645960
JQGF01002274
117923
Betaproteobacteria
CAG
Leu
>WENV170645961
JQGF01002276
117923
Betaproteobacteria
CAG
Leu
>WENV170646014
JQGF01006587
29693
Betaproteobacteria
TGA
Ser
>WENV170646030
JQGF01011307
29693
Betaproteobacteria
TGA
Ser
>WENV170645906
JQGF01000185
481019
Betaproteobacteria
CCC
Gly
>WENV170645969
JQGF01002412
400346
Betaproteobacteria
CCG
Arg
>WENV170645907
JQGF01000310
118059
Betaproteobacteria
TAG
Leu
>WENV170646028
JQGF01011117
400347
Betaproteobacteria
CAC
Val
>WENV170645959
JQGF01002103
178432
Betaproteobacteria
TCT
Arg
>WENV170646060
JQGF01020728
178432
Betaproteobacteria
TCT
Arg
>WENV170646061
JQGF01020729
178432
Betaproteobacteria
TCT
Arg
>WENV170645936
JQGF01001184
400348
Betaproteobacteria
CCT
Arg
>WENV170646006
JQGF01006165
400348
Betaproteobacteria
CCT
Arg
>WENV170645929
JQGF01001034
283191
Betaproteobacteria
CTT
Lys
>WENV170646015
JQGF01006587
100143
Betaproteobacteria
TAA
Leu
>WENV170646031
JQGF01011307
100143
Betaproteobacteria
TAA
Leu
>WENV170645987
JQGF01003650
29692
Betaproteobacteria
CGA
Ser
>WENV170645983
JQGF01003217
481018
Betaproteobacteria
GCA
Cys
>WENV170646052
JQGF01015555
481018
Betaproteobacteria
GCA
Cys
>WENV170646013
JQGF01006587
118195
Betaproteobacteria
GAG
Leu
>WENV170646018
JQGF01007557
8602
Betaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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