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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170647318
JQIA01020467
331330
Gammaproteobacteria
TAC
Val
>WENV170647416
JQIA01025656
198275
Gammaproteobacteria
TCT
Arg
>WENV170647192
JQIA01015403
236722
Gammaproteobacteria
ACG
Arg
>WENV170647007
JQIA01007750
282687
Gammaproteobacteria
GCC
Gly
>WENV170647606
JQIA01040470
178175
Gammaproteobacteria
ACG
Arg
>WENV170646743
JQIA01002531
292194
Gammaproteobacteria
GGT
Thr
>WENV170646685
JQIA01001441
282550
Gammaproteobacteria
TAC
Val
>WENV170646712
JQIA01001904
285953
Gammaproteobacteria
CCT
Arg
>WENV170646665
JQIA01001215
117798
Gammaproteobacteria
CAA
Leu
>WENV170646895
JQIA01005150
180718
Gammaproteobacteria
CAT
Met
>WENV170647570
JQIA01037071
306288
Gammaproteobacteria
GCC
Gly
>WENV170647277
JQIA01018658
306288
Gammaproteobacteria
GCC
Gly
>WENV170646998
JQIA01007644
282683
Gammaproteobacteria
GGC
Ala
>WENV170647138
JQIA01012884
282683
Gammaproteobacteria
GGC
Ala
>WENV170646605
JQIA01000244
32355
Gammaproteobacteria
GGA
Ser
>WENV170647015
JQIA01008110
178003
Gammaproteobacteria
ACG
Arg
>WENV170647273
JQIA01018193
283964
Gammaproteobacteria
TTT
Lys
>WENV170647415
JQIA01025656
201377
Gammaproteobacteria
TGG
Pro
>WENV170646794
JQIA01003301
120800
Gammaproteobacteria
CAA
Leu
>WENV170646893
JQIA01005145
282689
Gammaproteobacteria
GAA
Phe
>WENV170646820
JQIA01003825
282689
Gammaproteobacteria
GAA
Phe
>WENV170646819
JQIA01003825
282689
Gammaproteobacteria
GAA
Phe
>WENV170647367
JQIA01022937
281939
Gammaproteobacteria
TTT
Lys
>WENV170647331
JQIA01021374
282902
Gammaproteobacteria
TGT
Thr
>WENV170647056
JQIA01008951
282893
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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