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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170652874
JRYH01064542
140876
Alphaproteobacteria
>WENV170652697
JRYH01016230
178510
Alphaproteobacteria
ACG
Arg
>WENV170652476
JRYH01004121
141247
Alphaproteobacteria
CAA
Leu
>WENV170652540
JRYH01005432
179941
Alphaproteobacteria
CAT
Met
>WENV170652890
JRYH01078483
178315
Alphaproteobacteria
CAT
Met
>WENV170652413
JRYH01002488
296763
Alphaproteobacteria
CCA
Trp
>WENV170652656
JRYH01011925
515573
Alphaproteobacteria
CCC
Gly
>WENV170652314
JRYH01000753
183628
Alphaproteobacteria
CCG
Arg
>WENV170652475
JRYH01004051
238389
Alphaproteobacteria
CCT
Arg
>WENV170652341
JRYH01001010
283022
Alphaproteobacteria
CTT
Lys
>WENV170652392
JRYH01002061
283022
Alphaproteobacteria
CTT
Lys
>WENV170652769
JRYH01023648
315952
Alphaproteobacteria
GAA
Phe
>WENV170652810
JRYH01033772
399480
Alphaproteobacteria
GAA
Phe
>WENV170652609
JRYH01008797
400848
Alphaproteobacteria
GAC
Val
>WENV170652193
JRYH01000027
406705
Alphaproteobacteria
GAC
Val
>WENV170652653
JRYH01011267
406705
Alphaproteobacteria
GAC
Val
>WENV170652405
JRYH01002209
406705
Alphaproteobacteria
GAC
Val
>WENV170652204
JRYH01000079
406705
Alphaproteobacteria
GAC
Val
>WENV170652695
JRYH01015986
73490
Alphaproteobacteria
GAG
Leu
>WENV170652429
JRYH01003043
176633
Alphaproteobacteria
GAT
Ile
>WENV170652926
JRYH01109944
480960
Alphaproteobacteria
GCA
Cys
>WENV170652920
JRYH01105152
480900
Alphaproteobacteria
GCA
Cys
>WENV170652703
JRYH01016733
400249
Alphaproteobacteria
GCC
Gly
>WENV170652338
JRYH01000990
428327
Alphaproteobacteria
GCC
Gly
>WENV170652422
JRYH01002690
282589
Alphaproteobacteria
GGC
Ala
>WENV170652276
JRYH01000507
178815
Alphaproteobacteria
GGG
Pro
>WENV170652309
JRYH01000685
458954
Alphaproteobacteria
GGT
Thr
>WENV170652198
JRYH01000044
192236
Alphaproteobacteria
GTC
Asp
>WENV170652224
JRYH01000123
178240
Alphaproteobacteria
GTC
Asp
>WENV170652267
JRYH01000430
178240
Alphaproteobacteria
GTC
Asp
>WENV170652262
JRYH01000403
212319
Alphaproteobacteria
GTG
His
>WENV170652910
JRYH01095099
469975
Alphaproteobacteria
GTT
Asn
>WENV170652585
JRYH01007411
398994
Alphaproteobacteria
GTT
Asn
>WENV170652265
JRYH01000430
121655
Alphaproteobacteria
TAG
Leu
>WENV170652626
JRYH01009670
121990
Alphaproteobacteria
TAG
Leu
>WENV170652674
JRYH01013340
118150
Alphaproteobacteria
TAG
Leu
>WENV170652796
JRYH01030564
509917
Alphaproteobacteria
TCC
Gly
>WENV170652571
JRYH01006887
509917
Alphaproteobacteria
TCC
Gly
>WENV170652393
JRYH01002063
509917
Alphaproteobacteria
TCC
Gly
>WENV170652245
JRYH01000243
509917
Alphaproteobacteria
TCC
Gly
>WENV170652726
JRYH01019170
487436
Alphaproteobacteria
TCC
Gly
>WENV170652483
JRYH01004465
179390
Alphaproteobacteria
TGG
Pro
>WENV170652390
JRYH01002036
289359
Alphaproteobacteria
TTC
Glu
>WENV170652754
JRYH01022563
460338
Alphaproteobacteria
TTG
Gln
>WENV170652271
JRYH01000461
460338
Alphaproteobacteria
TTG
Gln
>WENV170652249
JRYH01000303
460338
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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