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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170652557
JRYH01006084
31263
Betaproteobacteria
CGA
Ser
>WENV170652692
JRYH01015665
178984
Betaproteobacteria
TCT
Arg
>WENV170652737
JRYH01020552
283784
Betaproteobacteria
CTT
Lys
>WENV170652592
JRYH01007676
300516
Betaproteobacteria
TTT
Lys
>WENV170652707
JRYH01017142
300516
Betaproteobacteria
TTT
Lys
>WENV170652657
JRYH01011950
5754
Betaproteobacteria
GCT
Ser
>WENV170652558
JRYH01006084
178985
Betaproteobacteria
ACG
Arg
>WENV170652562
JRYH01006255
178985
Betaproteobacteria
ACG
Arg
>WENV170652668
JRYH01012892
178985
Betaproteobacteria
ACG
Arg
>WENV170652596
JRYH01007799
467771
Betaproteobacteria
GGT
Thr
>WENV170652428
JRYH01003041
180176
Betaproteobacteria
CAT
Met
>WENV170652662
JRYH01012357
180176
Betaproteobacteria
CAT
Met
>WENV170652901
JRYH01088295
178430
Betaproteobacteria
TTG
Gln
>WENV170652683
JRYH01014512
188039
Betaproteobacteria
TCT
Arg
>WENV170652575
JRYH01007079
188039
Betaproteobacteria
TCT
Arg
>WENV170652705
JRYH01016886
118312
Betaproteobacteria
GAG
Leu
>WENV170652591
JRYH01007672
281681
Betaproteobacteria
TTT
Lys
>WENV170652605
JRYH01008410
281137
Betaproteobacteria
TTT
Lys
>WENV170652598
JRYH01007989
178981
Betaproteobacteria
CAT
Met
>WENV170652573
JRYH01007056
178982
Betaproteobacteria
TTG
Gln
>WENV170652679
JRYH01013768
178982
Betaproteobacteria
TTG
Gln
>WENV170652826
JRYH01038928
135014
Betaproteobacteria
GAG
Leu
>WENV170652543
JRYH01005587
400624
Betaproteobacteria
GGT
Thr
>WENV170652548
JRYH01005615
400624
Betaproteobacteria
GGT
Thr
>WENV170652452
JRYH01003700
283781
Betaproteobacteria
TGC
Ala
>WENV170652454
JRYH01003702
283781
Betaproteobacteria
TGC
Ala
>WENV170652803
JRYH01032631
88494
Betaproteobacteria
CAG
Leu
>WENV170652678
JRYH01013767
193851
Betaproteobacteria
TTG
Gln
>WENV170652583
JRYH01007190
193851
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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