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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653091
JRYI01002863
121655
Alphaproteobacteria
TAG
Leu
>WENV170653296
JRYI01055160
100383
Alphaproteobacteria
GTA
Tyr
>WENV170653184
JRYI01013612
401165
Alphaproteobacteria
CAC
Val
>WENV170653167
JRYI01009247
118482
Alphaproteobacteria
CAG
Leu
>WENV170653224
JRYI01023250
480960
Alphaproteobacteria
GCA
Cys
>WENV170653166
JRYI01009083
178240
Alphaproteobacteria
GTC
Asp
>WENV170653040
JRYI01001270
283022
Alphaproteobacteria
CTT
Lys
>WENV170653347
JRYI01091915
178252
Alphaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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