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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653038
JRYI01001198
178985
Betaproteobacteria
ACG
Arg
>WENV170653039
JRYI01001198
178985
Betaproteobacteria
ACG
Arg
>WENV170653268
JRYI01040235
117923
Betaproteobacteria
CAG
Leu
>WENV170653120
JRYI01004567
285019
Betaproteobacteria
CCT
Arg
>WENV170653037
JRYI01001198
31263
Betaproteobacteria
CGA
Ser
>WENV170653205
JRYI01016349
300522
Betaproteobacteria
CTT
Lys
>WENV170653203
JRYI01016120
283784
Betaproteobacteria
CTT
Lys
>WENV170653082
JRYI01002626
118312
Betaproteobacteria
GAG
Leu
>WENV170653174
JRYI01010809
282645
Betaproteobacteria
GCC
Gly
>WENV170653025
JRYI01000895
293769
Betaproteobacteria
GCC
Gly
>WENV170653159
JRYI01008633
293769
Betaproteobacteria
GCC
Gly
>WENV170653226
JRYI01024372
5754
Betaproteobacteria
GCT
Ser
>WENV170653196
JRYI01015693
20638
Betaproteobacteria
GGA
Ser
>WENV170653016
JRYI01000849
400624
Betaproteobacteria
GGT
Thr
>WENV170653160
JRYI01008633
400624
Betaproteobacteria
GGT
Thr
>WENV170653094
JRYI01003006
289755
Betaproteobacteria
TAC
Val
>WENV170653099
JRYI01003313
184269
Betaproteobacteria
TTG
Gln
>WENV170653247
JRYI01031717
178982
Betaproteobacteria
TTG
Gln
>WENV170653100
JRYI01003350
300516
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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