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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170653407
JRYJ01000151
121190
Betaproteobacteria
CAA
Leu
>WENV170653421
JRYJ01000531
284938
Betaproteobacteria
TTT
Lys
>WENV170653430
JRYJ01000710
504008
Betaproteobacteria
GCA
Cys
>WENV170653433
JRYJ01000737
188716
Betaproteobacteria
ACG
Arg
>WENV170653443
JRYJ01000977
333120
Betaproteobacteria
CCA
Trp
>WENV170653445
JRYJ01001100
178096
Betaproteobacteria
TCT
Arg
>WENV170653460
JRYJ01001430
20603
Betaproteobacteria
GGA
Ser
>WENV170653507
JRYJ01002963
504022
Betaproteobacteria
TCC
Gly
>WENV170653508
JRYJ01003066
227519
Betaproteobacteria
TTG
Gln
>WENV170653526
JRYJ01004201
120253
Betaproteobacteria
CAG
Leu
>WENV170653545
JRYJ01005171
289755
Betaproteobacteria
TAC
Val
>WENV170653553
JRYJ01005672
342564
Betaproteobacteria
CGC
Ala
>WENV170653558
JRYJ01005908
178096
Betaproteobacteria
TCT
Arg
>WENV170653559
JRYJ01005943
184269
Betaproteobacteria
TTG
Gln
>WENV170653583
JRYJ01008890
226192
Betaproteobacteria
GGG
Pro
>WENV170653601
JRYJ01011834
88494
Betaproteobacteria
CAG
Leu
>WENV170653673
JRYJ01032866
347462
Betaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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