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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170654529
JRYL01000207
186768
Betaproteobacteria
>WENV170654721
JRYL01009391
178985
Betaproteobacteria
ACG
Arg
>WENV170654620
JRYL01002280
195621
Betaproteobacteria
CAT
Met
>WENV170654710
JRYL01007742
285019
Betaproteobacteria
CCT
Arg
>WENV170654692
JRYL01005599
283784
Betaproteobacteria
CTT
Lys
>WENV170654704
JRYL01007141
481172
Betaproteobacteria
GCA
Cys
>WENV170654899
JRYL01072813
480566
Betaproteobacteria
GCA
Cys
>WENV170654611
JRYL01002067
5754
Betaproteobacteria
GCT
Ser
>WENV170654476
JRYL01000022
177009
Betaproteobacteria
GGG
Pro
>WENV170654917
JRYL01086958
409406
Betaproteobacteria
GGT
Thr
>WENV170654802
JRYL01023830
117806
Betaproteobacteria
GTA
Tyr
>WENV170654536
JRYL01000222
117806
Betaproteobacteria
GTA
Tyr
>WENV170654537
JRYL01000222
283554
Betaproteobacteria
TCC
Gly
>WENV170654715
JRYL01008245
178984
Betaproteobacteria
TCT
Arg
>WENV170654502
JRYL01000132
178096
Betaproteobacteria
TCT
Arg
>WENV170654923
JRYL01089915
60914
Betaproteobacteria
TGA
Ser
>WENV170654736
JRYL01010788
283781
Betaproteobacteria
TGC
Ala
>WENV170654696
JRYL01006630
283781
Betaproteobacteria
TGC
Ala
>WENV170654762
JRYL01014180
281681
Betaproteobacteria
TTT
Lys
>WENV170654903
JRYL01075432
281681
Betaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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