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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656080
JTFN01126508
186414
Alphaproteobacteria
CAT
Met
>WENV170655601
JTFN01050455
416697
Alphaproteobacteria
GAC
Val
>WENV170656096
JTFN01132472
416697
Alphaproteobacteria
GAC
Val
>WENV170655088
JTFN01004773
179390
Alphaproteobacteria
TGG
Pro
>WENV170655385
JTFN01027581
315952
Alphaproteobacteria
GAA
Phe
>WENV170655771
JTFN01071410
400387
Alphaproteobacteria
GGT
Thr
>WENV170655843
JTFN01082250
400387
Alphaproteobacteria
GGT
Thr
>WENV170655959
JTFN01102662
400387
Alphaproteobacteria
GGT
Thr
>WENV170656001
JTFN01113743
400387
Alphaproteobacteria
GGT
Thr
>WENV170655916
JTFN01094949
140963
Alphaproteobacteria
>WENV170655726
JTFN01063827
179858
Alphaproteobacteria
TCT
Arg
>WENV170655147
JTFN01008022
73490
Alphaproteobacteria
GAG
Leu
>WENV170655589
JTFN01048813
73490
Alphaproteobacteria
GAG
Leu
>WENV170655590
JTFN01048948
100353
Alphaproteobacteria
GTA
Tyr
>WENV170655668
JTFN01056170
509917
Alphaproteobacteria
TCC
Gly
>WENV170655214
JTFN01011736
509917
Alphaproteobacteria
TCC
Gly
>WENV170655001
JTFN01001468
509917
Alphaproteobacteria
TCC
Gly
>WENV170655500
JTFN01039139
281659
Alphaproteobacteria
TGC
Ala
>WENV170655122
JTFN01006174
238389
Alphaproteobacteria
CCT
Arg
>WENV170655408
JTFN01029318
238389
Alphaproteobacteria
CCT
Arg
>WENV170655044
JTFN01002599
179941
Alphaproteobacteria
CAT
Met
>WENV170655404
JTFN01029178
179941
Alphaproteobacteria
CAT
Met
>WENV170655405
JTFN01029179
179941
Alphaproteobacteria
CAT
Met
>WENV170655520
JTFN01040983
179941
Alphaproteobacteria
CAT
Met
>WENV170656099
JTFN01133673
179941
Alphaproteobacteria
CAT
Met
>WENV170655386
JTFN01027854
178509
Alphaproteobacteria
CCT
Arg
>WENV170655105
JTFN01005143
460338
Alphaproteobacteria
TTG
Gln
>WENV170655090
JTFN01004835
29701
Alphaproteobacteria
CGA
Ser
>WENV170655527
JTFN01041649
29701
Alphaproteobacteria
CGA
Ser
>WENV170655528
JTFN01041650
29701
Alphaproteobacteria
CGA
Ser
>WENV170656031
JTFN01118442
29701
Alphaproteobacteria
CGA
Ser
>WENV170655579
JTFN01048046
398994
Alphaproteobacteria
GTT
Asn
>WENV170655359
JTFN01024737
398994
Alphaproteobacteria
GTT
Asn
>WENV170655260
JTFN01015529
406705
Alphaproteobacteria
GAC
Val
>WENV170654995
JTFN01001380
178505
Alphaproteobacteria
CCG
Arg
>WENV170655406
JTFN01029230
178505
Alphaproteobacteria
CCG
Arg
>WENV170655989
JTFN01109121
178505
Alphaproteobacteria
CCG
Arg
>WENV170656075
JTFN01126207
284796
Alphaproteobacteria
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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