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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
69 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170655280
JTFN01017000
198275
Gammaproteobacteria
TCT
Arg
>WENV170655243
JTFN01014151
413476
Gammaproteobacteria
TCC
Gly
>WENV170655525
JTFN01041503
280808
Gammaproteobacteria
>WENV170655639
JTFN01053795
280808
Gammaproteobacteria
>WENV170655871
JTFN01089250
280808
Gammaproteobacteria
>WENV170655872
JTFN01089250
280808
Gammaproteobacteria
>WENV170655873
JTFN01089250
280808
Gammaproteobacteria
>WENV170655702
JTFN01059242
117811
Gammaproteobacteria
TAG
Leu
>WENV170655323
JTFN01021195
289747
Gammaproteobacteria
GTG
His
>WENV170655795
JTFN01075039
176173
Gammaproteobacteria
>WENV170655425
JTFN01030846
317362
Gammaproteobacteria
GGC
Ala
>WENV170655261
JTFN01015646
178544
Gammaproteobacteria
CAT
Met
>WENV170655699
JTFN01059242
412257
Gammaproteobacteria
TTG
Gln
>WENV170655703
JTFN01059242
412257
Gammaproteobacteria
TTG
Gln
>WENV170656050
JTFN01121455
412257
Gammaproteobacteria
TTG
Gln
>WENV170656052
JTFN01121455
412257
Gammaproteobacteria
TTG
Gln
>WENV170656055
JTFN01121455
412257
Gammaproteobacteria
TTG
Gln
>WENV170655041
JTFN01002495
176614
Gammaproteobacteria
GAC
Val
>WENV170655207
JTFN01011456
481036
Gammaproteobacteria
GCA
Cys
>WENV170655367
JTFN01025772
280811
Gammaproteobacteria
GTT
Asn
>WENV170655369
JTFN01025772
280811
Gammaproteobacteria
GTT
Asn
>WENV170655252
JTFN01014614
283282
Gammaproteobacteria
TTT
Lys
>WENV170655253
JTFN01014614
283282
Gammaproteobacteria
TTT
Lys
>WENV170655684
JTFN01057647
219509
Gammaproteobacteria
GAT
Ile
>WENV170655206
JTFN01011456
451238
Gammaproteobacteria
GCC
Gly
>WENV170655262
JTFN01015646
118219
Gammaproteobacteria
TAG
Leu
>WENV170655811
JTFN01078156
56104
Gammaproteobacteria
GGA
Ser
>WENV170655701
JTFN01059242
117812
Gammaproteobacteria
TAG
Leu
>WENV170655322
JTFN01021195
178547
Gammaproteobacteria
TCT
Arg
>WENV170655208
JTFN01011456
92638
Gammaproteobacteria
TAA
Leu
>WENV170655801
JTFN01075460
179595
Gammaproteobacteria
GAC
Val
>WENV170655444
JTFN01032643
282947
Gammaproteobacteria
GTT
Asn
>WENV170655306
JTFN01019906
280807
Gammaproteobacteria
CAT
Met
>WENV170656045
JTFN01120523
335783
Gammaproteobacteria
GTT
Asn
>WENV170656044
JTFN01120523
335783
Gammaproteobacteria
GTT
Asn
>WENV170655764
JTFN01070535
335783
Gammaproteobacteria
GTT
Asn
>WENV170655332
JTFN01021918
335783
Gammaproteobacteria
GTT
Asn
>WENV170655613
JTFN01052570
335783
Gammaproteobacteria
GTT
Asn
>WENV170655614
JTFN01052570
335783
Gammaproteobacteria
GTT
Asn
>WENV170655637
JTFN01053761
335783
Gammaproteobacteria
GTT
Asn
>WENV170655638
JTFN01053761
335783
Gammaproteobacteria
GTT
Asn
>WENV170655711
JTFN01060973
335783
Gammaproteobacteria
GTT
Asn
>WENV170655763
JTFN01070535
335783
Gammaproteobacteria
GTT
Asn
>WENV170655536
JTFN01042465
334421
Gammaproteobacteria
TGT
Thr
>WENV170656028
JTFN01117701
346373
Gammaproteobacteria
GAA
Phe
>WENV170655233
JTFN01013617
178549
Gammaproteobacteria
GTT
Asn
>WENV170655234
JTFN01013617
178549
Gammaproteobacteria
GTT
Asn
>WENV170655464
JTFN01034748
209813
Gammaproteobacteria
GAT
Ile
>WENV170655875
JTFN01089436
209813
Gammaproteobacteria
GAT
Ile
>WENV170656019
JTFN01115863
209813
Gammaproteobacteria
GAT
Ile
>WENV170655658
JTFN01055358
370389
Gammaproteobacteria
GGC
Ala
>WENV170655597
JTFN01049867
195535
Gammaproteobacteria
TCT
Arg
>WENV170655722
JTFN01062873
176301
Gammaproteobacteria
GAT
Ile
>WENV170655756
JTFN01069835
140787
Gammaproteobacteria
GAG
Leu
>WENV170655704
JTFN01059242
75013
Gammaproteobacteria
CAG
Leu
>WENV170655757
JTFN01069835
238652
Gammaproteobacteria
CAT
Met
>WENV170655351
JTFN01023779
179186
Gammaproteobacteria
TGG
Pro
>WENV170655535
JTFN01042464
421507
Gammaproteobacteria
GGT
Thr
>WENV170655975
JTFN01105461
421507
Gammaproteobacteria
GGT
Thr
>WENV170655534
JTFN01042464
402011
Gammaproteobacteria
TCC
Gly
>WENV170655538
JTFN01042465
402011
Gammaproteobacteria
TCC
Gly
>WENV170655974
JTFN01105461
402011
Gammaproteobacteria
TCC
Gly
>WENV170655221
JTFN01012554
282018
Gammaproteobacteria
TGT
Thr
>WENV170655244
JTFN01014181
218621
Gammaproteobacteria
TGG
Pro
>WENV170655353
JTFN01024180
218621
Gammaproteobacteria
TGG
Pro
>WENV170655276
JTFN01016638
280809
Gammaproteobacteria
GGT
Thr
>WENV170655812
JTFN01078194
179889
Gammaproteobacteria
CCT
Arg
>WENV170655596
JTFN01049707
480510
Gammaproteobacteria
>WENV170655693
JTFN01058889
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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