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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170668072
LADL02000799
178510
Alphaproteobacteria
ACG
Arg
>WENV170668369
LADL02003291
486926
Alphaproteobacteria
CCC
Gly
>WENV170668378
LADL02003416
400848
Alphaproteobacteria
GAC
Val
>WENV170668039
LADL02000428
424450
Alphaproteobacteria
GGT
Thr
>WENV170668325
LADL02002910
179390
Alphaproteobacteria
TGG
Pro
>WENV170668027
LADL02000300
315952
Alphaproteobacteria
GAA
Phe
>WENV170668364
LADL02003264
117818
Alphaproteobacteria
GTA
Tyr
>WENV170668177
LADL02001608
193463
Alphaproteobacteria
CCT
Arg
>WENV170668397
LADL02003509
176230
Alphaproteobacteria
CGG
Pro
>WENV170668351
LADL02003156
73490
Alphaproteobacteria
GAG
Leu
>WENV170668095
LADL02001003
176233
Alphaproteobacteria
>WENV170668336
LADL02003030
400384
Alphaproteobacteria
TTC
Glu
>WENV170668430
LADL02003781
499180
Alphaproteobacteria
TCC
Gly
>WENV170668247
LADL02002115
232927
Alphaproteobacteria
CAT
Met
>WENV170668339
LADL02003064
118387
Alphaproteobacteria
CAA
Leu
>WENV170668334
LADL02003009
118235
Alphaproteobacteria
TAG
Leu
>WENV170668208
LADL02001870
287439
Alphaproteobacteria
CCA
Trp
>WENV170668096
LADL02001014
179941
Alphaproteobacteria
CAT
Met
>WENV170668021
LADL02000224
400249
Alphaproteobacteria
GCC
Gly
>WENV170668279
LADL02002429
141247
Alphaproteobacteria
CAA
Leu
>WENV170668124
LADL02001240
282872
Alphaproteobacteria
CCA
Trp
>WENV170668404
LADL02003535
402067
Alphaproteobacteria
GCC
Gly
>WENV170668188
LADL02001719
303547
Alphaproteobacteria
GAA
Phe
>WENV170668058
LADL02000596
182475
Alphaproteobacteria
GTC
Asp
>WENV170668135
LADL02001334
182475
Alphaproteobacteria
GTC
Asp
>WENV170668433
LADL02003825
182475
Alphaproteobacteria
GTC
Asp
>WENV170668388
LADL02003425
432384
Alphaproteobacteria
GGT
Thr
>WENV170668115
LADL02001128
228432
Alphaproteobacteria
TGG
Pro
>WENV170668293
LADL02002551
398994
Alphaproteobacteria
GTT
Asn
>WENV170668278
LADL02002386
350583
Alphaproteobacteria
TAC
Val
>WENV170668116
LADL02001128
188243
Alphaproteobacteria
TCT
Arg
>WENV170668219
LADL02001999
354296
Alphaproteobacteria
TAC
Val
>WENV170668258
LADL02002177
178507
Alphaproteobacteria
GTG
His
>WENV170668120
LADL02001166
353624
Alphaproteobacteria
CCA
Trp
>WENV170668113
LADL02001128
399044
Alphaproteobacteria
>WENV170668114
LADL02001128
399044
Alphaproteobacteria
>WENV170668125
LADL02001251
400693
Alphaproteobacteria
GCC
Gly
>WENV170668396
LADL02003494
102909
Alphaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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