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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170669346
LAHS01000016
282591
Alphaproteobacteria
GTT
Asn
>WENV170669350
LAHS01000016
282611
Alphaproteobacteria
GAA
Phe
>WENV170669379
LAHS01000063
282587
Alphaproteobacteria
>WENV170669380
LAHS01000063
282586
Alphaproteobacteria
CGT
Thr
>WENV170669382
LAHS01000063
480871
Alphaproteobacteria
TCC
Gly
>WENV170669383
LAHS01000063
177957
Alphaproteobacteria
ACG
Arg
>WENV170669475
LAHS01000332
31982
Alphaproteobacteria
TGA
Ser
>WENV170669476
LAHS01000332
209937
Alphaproteobacteria
TGG
Pro
>WENV170669477
LAHS01000332
177941
Alphaproteobacteria
TCT
Arg
>WENV170669478
LAHS01000332
177937
Alphaproteobacteria
GGG
Pro
>WENV170669479
LAHS01000332
118064
Alphaproteobacteria
TAG
Leu
>WENV170669480
LAHS01000332
401168
Alphaproteobacteria
TAC
Val
>WENV170669496
LAHS01000342
480868
Alphaproteobacteria
CCC
Gly
>WENV170669497
LAHS01000342
107878
Alphaproteobacteria
GTA
Tyr
>WENV170669498
LAHS01000342
349801
Alphaproteobacteria
GTG
His
>WENV170669500
LAHS01000362
400029
Alphaproteobacteria
GGT
Thr
>WENV170669503
LAHS01000362
419842
Alphaproteobacteria
GCC
Gly
>WENV170669504
LAHS01000362
400030
Alphaproteobacteria
TGT
Thr
>WENV170669505
LAHS01000362
400031
Alphaproteobacteria
TTG
Gln
>WENV170669506
LAHS01000362
316763
Alphaproteobacteria
GGC
Ala
>WENV170669539
LAHS01000455
177954
Alphaproteobacteria
CAT
Met
>WENV170669549
LAHS01000533
195438
Alphaproteobacteria
GAT
Ile
>WENV170669550
LAHS01000533
284853
Alphaproteobacteria
TGC
Ala
>WENV170669627
LAHS01000929
399349
Alphaproteobacteria
CAC
Val
>WENV170669649
LAHS01001063
105198
Alphaproteobacteria
GAG
Leu
>WENV170669650
LAHS01001063
401169
Alphaproteobacteria
CAT
Met
>WENV170669651
LAHS01001075
480878
Alphaproteobacteria
GCA
Cys
>WENV170669738
LAHS01002018
480870
Alphaproteobacteria
CTG
Gln
>WENV170669769
LAHS01002394
20348
Alphaproteobacteria
GGA
Ser
>WENV170670056
LAHS01022372
281659
Alphaproteobacteria
TGC
Ala
>WENV170670170
LAHS01080468
480392
Alphaproteobacteria
GCA
Cys
>WENV170670219
LAHS01120844
400069
Alphaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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