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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170670732
LAHU01000058
156821
Euryarchaeota
CAT
Met
>WENV170670734
LAHU01000103
156821
Euryarchaeota
CAT
Met
>WENV170670735
LAHU01000125
284163
Euryarchaeota
GTT
Asn
>WENV170670739
LAHU01000138
56528
Euryarchaeota
GCT
Ser
>WENV170670774
LAHU01000802
400789
Euryarchaeota
GCC
Gly
>WENV170670778
LAHU01001000
400789
Euryarchaeota
GCC
Gly
>WENV170670837
LAHU01002204
284163
Euryarchaeota
GTT
Asn
>WENV170670881
LAHU01003268
179043
Euryarchaeota
GTA
Tyr
>WENV170670883
LAHU01003268
195992
Euryarchaeota
TTT
Lys
>WENV170670910
LAHU01004275
156309
Euryarchaeota
TTC
Glu
>WENV170670942
LAHU01005645
284163
Euryarchaeota
GTT
Asn
>WENV170670960
LAHU01006428
179051
Euryarchaeota
TGC
Ala
>WENV170670961
LAHU01006430
238254
Euryarchaeota
GGC
Ala
>WENV170670967
LAHU01006576
400789
Euryarchaeota
GCC
Gly
>WENV170670990
LAHU01007411
156309
Euryarchaeota
TTC
Glu
>WENV170670993
LAHU01007473
400638
Euryarchaeota
GCA
Cys
>WENV170671032
LAHU01009364
158999
Euryarchaeota
TCT
Arg
>WENV170671060
LAHU01010551
283854
Euryarchaeota
GTT
Asn
>WENV170671062
LAHU01010551
156252
Euryarchaeota
TTC
Glu
>WENV170671061
LAHU01010551
179048
Euryarchaeota
CAT
Met
>WENV170671119
LAHU01015446
56475
Euryarchaeota
GGA
Ser
>WENV170671131
LAHU01017321
56528
Euryarchaeota
GCT
Ser
>WENV170671147
LAHU01019053
400638
Euryarchaeota
GCA
Cys
>WENV170671205
LAHU01025615
283858
Euryarchaeota
GAA
Phe
>WENV170671364
LAHU01043031
179047
Euryarchaeota
CGT
Thr
>WENV170671395
LAHU01046462
409957
Euryarchaeota
GCG
Arg
>WENV170671403
LAHU01046962
179041
Euryarchaeota
TCT
Arg
>WENV170671402
LAHU01046962
179041
Euryarchaeota
TCT
Arg
>WENV170671419
LAHU01050589
200227
Euryarchaeota
GAC
Val
>WENV170671490
LAHU01065957
152140
Euryarchaeota
TCG
Arg
>WENV170671519
LAHU01071802
56528
Euryarchaeota
GCT
Ser
>WENV170671563
LAHU01087300
283854
Euryarchaeota
GTT
Asn
>WENV170671589
LAHU01095375
283858
Euryarchaeota
GAA
Phe
>WENV170671605
LAHU01102728
158139
Euryarchaeota
CAT
Met
>WENV170671696
LAHU01133190
158139
Euryarchaeota
CAT
Met
>WENV170671701
LAHU01135063
196885
Euryarchaeota
TGT
Thr
>WENV170671778
LAHU01164474
303566
Euryarchaeota
CTG
Gln
>WENV170671815
LAHU01177586
400789
Euryarchaeota
GCC
Gly
>WENV170671823
LAHU01182434
284163
Euryarchaeota
GTT
Asn
>WENV170672019
LAHU01272838
152140
Euryarchaeota
TCG
Arg
>WENV170672034
LAHU01279001
283853
Euryarchaeota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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