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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170675827
LDZQ01000830
283854
Euryarchaeota
GTT
Asn
>WENV170675905
LDZQ01001231
283854
Euryarchaeota
GTT
Asn
>WENV170675893
LDZQ01001192
400639
Euryarchaeota
GTC
Asp
>WENV170675697
LDZQ01000296
179046
Euryarchaeota
GCC
Gly
>WENV170675912
LDZQ01001239
179046
Euryarchaeota
GCC
Gly
>WENV170675920
LDZQ01001334
179046
Euryarchaeota
GCC
Gly
>WENV170675994
LDZQ01001680
179309
Euryarchaeota
TAC
Val
>WENV170675987
LDZQ01001625
156304
Euryarchaeota
TGG
Pro
>WENV170675984
LDZQ01001625
156287
Euryarchaeota
CAT
Met
>WENV170675919
LDZQ01001315
158139
Euryarchaeota
CAT
Met
>WENV170675911
LDZQ01001234
158139
Euryarchaeota
CAT
Met
>WENV170675977
LDZQ01001548
156290
Euryarchaeota
TTC
Glu
>WENV170675995
LDZQ01001688
63529
Euryarchaeota
>WENV170675696
LDZQ01000276
179051
Euryarchaeota
TGC
Ala
>WENV170675976
LDZQ01001547
160843
Euryarchaeota
>WENV170675681
LDZQ01000004
284151
Euryarchaeota
>WENV170675982
LDZQ01001619
284151
Euryarchaeota
>WENV170675998
LDZQ01001692
156300
Euryarchaeota
GAT
Ile
>WENV170675991
LDZQ01001666
62427
Euryarchaeota
>WENV170675986
LDZQ01001625
179314
Euryarchaeota
TGT
Thr
>WENV170675989
LDZQ01001657
179308
Euryarchaeota
GAA
Phe
>WENV170675818
LDZQ01000609
156566
Euryarchaeota
CTC
Glu
>WENV170675914
LDZQ01001263
283858
Euryarchaeota
GAA
Phe
>WENV170675790
LDZQ01000577
401997
Euryarchaeota
GCA
Cys
>WENV170675980
LDZQ01001581
56514
Euryarchaeota
>WENV170676001
LDZQ01001703
156288
Euryarchaeota
CGG
Pro
>WENV170675830
LDZQ01000830
77488
Euryarchaeota
TAG
Leu
>WENV170675908
LDZQ01001231
77488
Euryarchaeota
TAG
Leu
>WENV170675820
LDZQ01000615
161335
Euryarchaeota
TCT
Arg
>WENV170675814
LDZQ01000600
83369
Euryarchaeota
TAA
Leu
>WENV170675816
LDZQ01000602
156569
Euryarchaeota
CAT
Met
>WENV170675802
LDZQ01000583
401993
Euryarchaeota
>WENV170675804
LDZQ01000584
401993
Euryarchaeota
>WENV170675890
LDZQ01001192
194156
Euryarchaeota
TGT
Thr
>WENV170675833
LDZQ01000861
194156
Euryarchaeota
TGT
Thr
>WENV170675902
LDZQ01001209
238254
Euryarchaeota
GGC
Ala
>WENV170675993
LDZQ01001676
179307
Euryarchaeota
GTG
His
>WENV170675979
LDZQ01001565
179310
Euryarchaeota
CGT
Thr
>WENV170676005
LDZQ01001828
179310
Euryarchaeota
CGT
Thr
>WENV170675996
LDZQ01001688
164525
Euryarchaeota
GGG
Pro
>WENV170676004
LDZQ01001804
179306
Euryarchaeota
GGT
Thr
>WENV170675974
LDZQ01001546
156286
Euryarchaeota
GCG
Arg
>WENV170675694
LDZQ01000272
179311
Euryarchaeota
TCT
Arg
>WENV170675693
LDZQ01000203
179311
Euryarchaeota
TCT
Arg
>WENV170676003
LDZQ01001799
156289
Euryarchaeota
GTC
Asp
>WENV170675997
LDZQ01001692
156299
Euryarchaeota
CTC
Glu
>WENV170675872
LDZQ01001155
315347
Euryarchaeota
TGC
Ala
>WENV170675829
LDZQ01000830
156309
Euryarchaeota
TTC
Glu
>WENV170675907
LDZQ01001231
156309
Euryarchaeota
TTC
Glu
>WENV170675988
LDZQ01001636
156285
Euryarchaeota
CTT
Lys
>WENV170675828
LDZQ01000830
179048
Euryarchaeota
CAT
Met
>WENV170675906
LDZQ01001231
179048
Euryarchaeota
CAT
Met
>WENV170675807
LDZQ01000586
402003
Euryarchaeota
GTG
His
>WENV170675823
LDZQ01000715
409957
Euryarchaeota
GCG
Arg
>WENV170675810
LDZQ01000590
481815
Euryarchaeota
TCC
Gly
>WENV170675891
LDZQ01001192
156251
Euryarchaeota
TGG
Pro
>WENV170675894
LDZQ01001192
195992
Euryarchaeota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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