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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
59 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170676486
LDZS01000042
179308
Euryarchaeota
GAA
Phe
>WENV170676490
LDZS01000100
60569
Euryarchaeota
GGA
Ser
>WENV170676495
LDZS01000189
156296
Euryarchaeota
GCC
Gly
>WENV170676504
LDZS01000292
179309
Euryarchaeota
TAC
Val
>WENV170676509
LDZS01000335
156293
Euryarchaeota
>WENV170676541
LDZS01001060
179051
Euryarchaeota
TGC
Ala
>WENV170676542
LDZS01001062
179310
Euryarchaeota
CGT
Thr
>WENV170676549
LDZS01001209
283858
Euryarchaeota
GAA
Phe
>WENV170676558
LDZS01001556
179051
Euryarchaeota
TGC
Ala
>WENV170676561
LDZS01001628
156312
Euryarchaeota
CAT
Met
>WENV170676578
LDZS01001640
315347
Euryarchaeota
TGC
Ala
>WENV170676680
LDZS01001897
420684
Euryarchaeota
>WENV170676679
LDZS01001897
420684
Euryarchaeota
>WENV170676684
LDZS01001901
152140
Euryarchaeota
TCG
Arg
>WENV170676686
LDZS01001903
77761
Euryarchaeota
GAG
Leu
>WENV170676690
LDZS01001915
400639
Euryarchaeota
GTC
Asp
>WENV170676687
LDZS01001915
194156
Euryarchaeota
TGT
Thr
>WENV170676688
LDZS01001915
156251
Euryarchaeota
TGG
Pro
>WENV170676691
LDZS01001915
195992
Euryarchaeota
TTT
Lys
>WENV170676692
LDZS01001916
60569
Euryarchaeota
GGA
Ser
>WENV170676694
LDZS01001953
179046
Euryarchaeota
GCC
Gly
>WENV170676696
LDZS01001955
409957
Euryarchaeota
GCG
Arg
>WENV170676699
LDZS01001968
156862
Euryarchaeota
CCT
Arg
>WENV170676703
LDZS01001983
283858
Euryarchaeota
GAA
Phe
>WENV170676704
LDZS01002002
283854
Euryarchaeota
GTT
Asn
>WENV170676707
LDZS01002002
77488
Euryarchaeota
TAG
Leu
>WENV170676706
LDZS01002002
156309
Euryarchaeota
TTC
Glu
>WENV170676705
LDZS01002002
179048
Euryarchaeota
CAT
Met
>WENV170676714
LDZS01002030
56515
Euryarchaeota
CAA
Leu
>WENV170676713
LDZS01002030
156293
Euryarchaeota
>WENV170676715
LDZS01002031
284151
Euryarchaeota
>WENV170676716
LDZS01002034
159008
Euryarchaeota
TTT
Lys
>WENV170676717
LDZS01002035
179313
Euryarchaeota
TGC
Ala
>WENV170676720
LDZS01002036
156304
Euryarchaeota
TGG
Pro
>WENV170676726
LDZS01002036
156287
Euryarchaeota
CAT
Met
>WENV170676719
LDZS01002036
179314
Euryarchaeota
TGT
Thr
>WENV170676723
LDZS01002036
156286
Euryarchaeota
GCG
Arg
>WENV170676724
LDZS01002036
56513
Euryarchaeota
TAA
Leu
>WENV170676722
LDZS01002036
400771
Euryarchaeota
GCA
Cys
>WENV170676727
LDZS01002041
156288
Euryarchaeota
CGG
Pro
>WENV170676728
LDZS01002043
156303
Euryarchaeota
>WENV170676729
LDZS01002048
179306
Euryarchaeota
GGT
Thr
>WENV170676730
LDZS01002050
156301
Euryarchaeota
GTA
Tyr
>WENV170676731
LDZS01002057
284151
Euryarchaeota
>WENV170676732
LDZS01002058
160843
Euryarchaeota
>WENV170676734
LDZS01002060
156300
Euryarchaeota
GAT
Ile
>WENV170676733
LDZS01002060
156299
Euryarchaeota
CTC
Glu
>WENV170676735
LDZS01002065
156289
Euryarchaeota
GTC
Asp
>WENV170676736
LDZS01002068
56514
Euryarchaeota
>WENV170676738
LDZS01002072
156301
Euryarchaeota
GTA
Tyr
>WENV170676740
LDZS01002087
156298
Euryarchaeota
CAT
Met
>WENV170676741
LDZS01002098
179307
Euryarchaeota
GTG
His
>WENV170676744
LDZS01002107
56514
Euryarchaeota
>WENV170676743
LDZS01002107
156285
Euryarchaeota
CTT
Lys
>WENV170676965
LDZS01003793
156290
Euryarchaeota
TTC
Glu
>WENV170676966
LDZS01003807
179310
Euryarchaeota
CGT
Thr
>WENV170676967
LDZS01003814
179310
Euryarchaeota
CGT
Thr
>WENV170676969
LDZS01003822
73698
Euryarchaeota
TGA
Ser
>WENV170676970
LDZS01003831
56514
Euryarchaeota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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