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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170681033
LFEF01045243
73116
Gammaproteobacteria
CAA
Leu
>WENV170680608
LFEF01003001
184467
Gammaproteobacteria
TCT
Arg
>WENV170681039
LFEF01045538
400267
Gammaproteobacteria
CTG
Gln
>WENV170680661
LFEF01008280
9062
Gammaproteobacteria
GCT
Ser
>WENV170680916
LFEF01034003
30633
Gammaproteobacteria
GGA
Ser
>WENV170680713
LFEF01013064
398941
Gammaproteobacteria
CTC
Glu
>WENV170680746
LFEF01017246
178305
Gammaproteobacteria
GGG
Pro
>WENV170680690
LFEF01010639
480983
Gammaproteobacteria
CCC
Gly
>WENV170680822
LFEF01024800
293662
Gammaproteobacteria
GGT
Thr
>WENV170680589
LFEF01000695
398939
Gammaproteobacteria
TAC
Val
>WENV170680928
LFEF01035653
296808
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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