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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170682833
LFIK01001554
178539
Gammaproteobacteria
GAC
Val
>WENV170682834
LFIK01001554
178539
Gammaproteobacteria
GAC
Val
>WENV170682912
LFIK01002579
178539
Gammaproteobacteria
GAC
Val
>WENV170683522
LFIK01014674
74766
Gammaproteobacteria
CAG
Leu
>WENV170683309
LFIK01008751
73781
Gammaproteobacteria
TAA
Leu
>WENV170683407
LFIK01011106
197233
Gammaproteobacteria
CAT
Met
>WENV170683492
LFIK01013288
197233
Gammaproteobacteria
CAT
Met
>WENV170683214
LFIK01007033
178777
Gammaproteobacteria
CCG
Arg
>WENV170683040
LFIK01003706
285363
Gammaproteobacteria
TGT
Thr
>WENV170683544
LFIK01015243
176868
Gammaproteobacteria
CAT
Met
>WENV170683337
LFIK01009388
190706
Gammaproteobacteria
ACG
Arg
>WENV170683336
LFIK01009388
190706
Gammaproteobacteria
ACG
Arg
>WENV170683021
LFIK01003542
243308
Gammaproteobacteria
TGG
Pro
>WENV170683157
LFIK01005596
443066
Gammaproteobacteria
GGT
Thr
>WENV170682417
LFIK01000099
508107
Gammaproteobacteria
GCA
Cys
>WENV170683308
LFIK01008751
508107
Gammaproteobacteria
GCA
Cys
>WENV170683434
LFIK01011702
508107
Gammaproteobacteria
GCA
Cys
>WENV170683635
LFIK01017227
439047
Gammaproteobacteria
GTG
His
>WENV170683416
LFIK01011145
481325
Gammaproteobacteria
TCC
Gly
>WENV170682561
LFIK01000345
207735
Gammaproteobacteria
GAC
Val
>WENV170683646
LFIK01017735
176301
Gammaproteobacteria
GAT
Ile
>WENV170683151
LFIK01005494
176301
Gammaproteobacteria
GAT
Ile
>WENV170683315
LFIK01008861
179186
Gammaproteobacteria
TGG
Pro
>WENV170682339
LFIK01000004
342263
Gammaproteobacteria
TTT
Lys
>WENV170682340
LFIK01000004
342263
Gammaproteobacteria
TTT
Lys
>WENV170682994
LFIK01003230
342263
Gammaproteobacteria
TTT
Lys
>WENV170682995
LFIK01003230
342263
Gammaproteobacteria
TTT
Lys
>WENV170682357
LFIK01000016
344043
Gammaproteobacteria
TAC
Val
>WENV170682355
LFIK01000016
344043
Gammaproteobacteria
TAC
Val
>WENV170682637
LFIK01000684
201377
Gammaproteobacteria
TGG
Pro
>WENV170683421
LFIK01011275
181277
Gammaproteobacteria
ACG
Arg
>WENV170683135
LFIK01005323
282018
Gammaproteobacteria
TGT
Thr
>WENV170683404
LFIK01010933
296680
Gammaproteobacteria
GTT
Asn
>WENV170683668
LFIK01018571
296680
Gammaproteobacteria
GTT
Asn
>WENV170683039
LFIK01003706
400928
Gammaproteobacteria
>WENV170683632
LFIK01017198
184457
Gammaproteobacteria
GGG
Pro
>WENV170683259
LFIK01007789
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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