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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170696112
LGVE01223769
118218
Gammaproteobacteria
TAG
Leu
>WENV170695473
LGVE01100836
353123
Gammaproteobacteria
CCA
Trp
>WENV170696091
LGVE01214901
178538
Gammaproteobacteria
GTC
Asp
>WENV170696040
LGVE01202228
284693
Gammaproteobacteria
TTC
Glu
>WENV170694878
LGVE01015721
229289
Gammaproteobacteria
TGG
Pro
>WENV170696003
LGVE01195740
444310
Gammaproteobacteria
TTG
Gln
>WENV170696057
LGVE01205868
178535
Gammaproteobacteria
CCT
Arg
>WENV170695993
LGVE01194949
178540
Gammaproteobacteria
TGG
Pro
>WENV170696138
LGVE01233972
73498
Gammaproteobacteria
CAA
Leu
>WENV170695472
LGVE01100836
443066
Gammaproteobacteria
GGT
Thr
>WENV170694985
LGVE01029233
281418
Gammaproteobacteria
TGC
Ala
>WENV170694740
LGVE01005380
176301
Gammaproteobacteria
GAT
Ile
>WENV170696107
LGVE01222072
89769
Gammaproteobacteria
CAG
Leu
>WENV170695470
LGVE01100836
140861
Gammaproteobacteria
GTA
Tyr
>WENV170696019
LGVE01197874
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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