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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170700520
LIDZ01014977
282618
Gammaproteobacteria
GTG
His
>WENV170700055
LIDZ01000623
281353
Gammaproteobacteria
TAC
Val
>WENV170700056
LIDZ01000623
281353
Gammaproteobacteria
TAC
Val
>WENV170700168
LIDZ01005649
176628
Gammaproteobacteria
GGG
Pro
>WENV170700428
LIDZ01013815
176628
Gammaproteobacteria
GGG
Pro
>WENV170700309
LIDZ01011724
281229
Gammaproteobacteria
GTT
Asn
>WENV170700540
LIDZ01015155
281229
Gammaproteobacteria
GTT
Asn
>WENV170700558
LIDZ01015380
281229
Gammaproteobacteria
GTT
Asn
>WENV170700164
LIDZ01005310
195718
Gammaproteobacteria
GAC
Val
>WENV170700486
LIDZ01014524
29449
Gammaproteobacteria
CGA
Ser
>WENV170700115
LIDZ01002944
183986
Gammaproteobacteria
GAC
Val
>WENV170700117
LIDZ01002944
183986
Gammaproteobacteria
GAC
Val
>WENV170700099
LIDZ01001855
486387
Gammaproteobacteria
GCA
Cys
>WENV170700159
LIDZ01004259
176631
Gammaproteobacteria
CCT
Arg
>WENV170700203
LIDZ01008004
401696
Gammaproteobacteria
TTG
Gln
>WENV170700505
LIDZ01014700
401696
Gammaproteobacteria
TTG
Gln
>WENV170700576
LIDZ01015607
401696
Gammaproteobacteria
TTG
Gln
>WENV170700598
LIDZ01015692
401696
Gammaproteobacteria
TTG
Gln
>WENV170700250
LIDZ01009451
184786
Gammaproteobacteria
GAC
Val
>WENV170700252
LIDZ01009451
184786
Gammaproteobacteria
GAC
Val
>WENV170700067
LIDZ01000898
117901
Gammaproteobacteria
GTA
Tyr
>WENV170700107
LIDZ01002764
117901
Gammaproteobacteria
GTA
Tyr
>WENV170700108
LIDZ01002764
117901
Gammaproteobacteria
GTA
Tyr
>WENV170700161
LIDZ01004539
117901
Gammaproteobacteria
GTA
Tyr
>WENV170700189
LIDZ01006889
117901
Gammaproteobacteria
GTA
Tyr
>WENV170700058
LIDZ01000691
401199
Gammaproteobacteria
TCC
Gly
>WENV170700449
LIDZ01013989
176868
Gammaproteobacteria
CAT
Met
>WENV170700416
LIDZ01013577
29592
Gammaproteobacteria
GGA
Ser
>WENV170700184
LIDZ01006827
175980
Gammaproteobacteria
CAT
Met
>WENV170700186
LIDZ01006827
175980
Gammaproteobacteria
CAT
Met
>WENV170700392
LIDZ01013307
283441
Gammaproteobacteria
>WENV170700100
LIDZ01001855
73756
Gammaproteobacteria
>WENV170700304
LIDZ01011521
99859
Gammaproteobacteria
TAA
Leu
>WENV170700293
LIDZ01011282
197506
Gammaproteobacteria
CAT
Met
>WENV170700390
LIDZ01013307
197506
Gammaproteobacteria
CAT
Met
>WENV170700552
LIDZ01015363
197506
Gammaproteobacteria
CAT
Met
>WENV170700071
LIDZ01001099
8498
Gammaproteobacteria
GCT
Ser
>WENV170700102
LIDZ01002273
117757
Gammaproteobacteria
>WENV170700176
LIDZ01005758
117757
Gammaproteobacteria
>WENV170700154
LIDZ01004176
399301
Gammaproteobacteria
TTG
Gln
>WENV170700155
LIDZ01004176
399301
Gammaproteobacteria
TTG
Gln
>WENV170700185
LIDZ01006827
399301
Gammaproteobacteria
TTG
Gln
>WENV170700451
LIDZ01014082
289050
Gammaproteobacteria
CCA
Trp
>WENV170700629
LIDZ01015821
289050
Gammaproteobacteria
CCA
Trp
>WENV170700094
LIDZ01001807
179440
Gammaproteobacteria
CCG
Arg
>WENV170700251
LIDZ01009451
179595
Gammaproteobacteria
GAC
Val
>WENV170700389
LIDZ01013168
117931
Gammaproteobacteria
CAA
Leu
>WENV170700150
LIDZ01004099
281544
Gammaproteobacteria
GAA
Phe
>WENV170700162
LIDZ01004614
281544
Gammaproteobacteria
GAA
Phe
>WENV170700296
LIDZ01011453
281544
Gammaproteobacteria
GAA
Phe
>WENV170700133
LIDZ01003022
185104
Gammaproteobacteria
CAT
Met
>WENV170700223
LIDZ01008572
400950
Gammaproteobacteria
CCT
Arg
>WENV170700182
LIDZ01006725
400950
Gammaproteobacteria
CCT
Arg
>WENV170700072
LIDZ01001099
195083
Gammaproteobacteria
ACG
Arg
>WENV170700219
LIDZ01008441
195083
Gammaproteobacteria
ACG
Arg
>WENV170700220
LIDZ01008441
195083
Gammaproteobacteria
ACG
Arg
>WENV170700221
LIDZ01008441
195083
Gammaproteobacteria
ACG
Arg
>WENV170700069
LIDZ01001094
56566
Gammaproteobacteria
GGA
Ser
>WENV170700167
LIDZ01005507
56566
Gammaproteobacteria
GGA
Ser
>WENV170700066
LIDZ01000898
281352
Gammaproteobacteria
TGT
Thr
>WENV170700147
LIDZ01004067
281352
Gammaproteobacteria
TGT
Thr
>WENV170700372
LIDZ01012780
281352
Gammaproteobacteria
TGT
Thr
>WENV170700378
LIDZ01013024
77630
Gammaproteobacteria
CAG
Leu
>WENV170700413
LIDZ01013556
77630
Gammaproteobacteria
CAG
Leu
>WENV170700414
LIDZ01013556
77630
Gammaproteobacteria
CAG
Leu
>WENV170700514
LIDZ01014944
32543
Gammaproteobacteria
CGA
Ser
>WENV170700289
LIDZ01010902
481686
Gammaproteobacteria
CCC
Gly
>WENV170700290
LIDZ01010997
481686
Gammaproteobacteria
CCC
Gly
>WENV170700456
LIDZ01014242
481686
Gammaproteobacteria
CCC
Gly
>WENV170700619
LIDZ01015773
481686
Gammaproteobacteria
CCC
Gly
>WENV170700284
LIDZ01010394
178830
Gammaproteobacteria
CAT
Met
>WENV170700261
LIDZ01010040
179582
Gammaproteobacteria
TCT
Arg
>WENV170700160
LIDZ01004299
4101
Gammaproteobacteria
>WENV170700152
LIDZ01004165
117930
Gammaproteobacteria
CAA
Leu
>WENV170700374
LIDZ01012892
117930
Gammaproteobacteria
CAA
Leu
>WENV170700605
LIDZ01015708
117930
Gammaproteobacteria
CAA
Leu
>WENV170700081
LIDZ01001163
73882
Gammaproteobacteria
CAG
Leu
>WENV170700096
LIDZ01001807
73882
Gammaproteobacteria
CAG
Leu
>WENV170700387
LIDZ01013168
73882
Gammaproteobacteria
CAG
Leu
>WENV170700388
LIDZ01013168
73882
Gammaproteobacteria
CAG
Leu
>WENV170700057
LIDZ01000623
303915
Gammaproteobacteria
TTT
Lys
>WENV170700146
LIDZ01004035
303915
Gammaproteobacteria
TTT
Lys
>WENV170700157
LIDZ01004189
303915
Gammaproteobacteria
TTT
Lys
>WENV170700158
LIDZ01004189
303915
Gammaproteobacteria
TTT
Lys
>WENV170700210
LIDZ01008394
303915
Gammaproteobacteria
TTT
Lys
>WENV170700211
LIDZ01008394
303915
Gammaproteobacteria
TTT
Lys
>WENV170700229
LIDZ01008572
303915
Gammaproteobacteria
TTT
Lys
>WENV170700529
LIDZ01015061
73819
Gammaproteobacteria
CAG
Leu
>WENV170700530
LIDZ01015061
73819
Gammaproteobacteria
CAG
Leu
>WENV170700170
LIDZ01005670
73031
Gammaproteobacteria
>WENV170700303
LIDZ01011521
480510
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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