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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170702272
LKMJ01001198
178539
Gammaproteobacteria
GAC
Val
>WENV170702273
LKMJ01001198
178539
Gammaproteobacteria
GAC
Val
>WENV170704172
LKMJ01024156
74766
Gammaproteobacteria
CAG
Leu
>WENV170703273
LKMJ01008780
73781
Gammaproteobacteria
TAA
Leu
>WENV170703776
LKMJ01016571
197233
Gammaproteobacteria
CAT
Met
>WENV170702471
LKMJ01002127
285363
Gammaproteobacteria
TGT
Thr
>WENV170704028
LKMJ01020885
190706
Gammaproteobacteria
ACG
Arg
>WENV170704029
LKMJ01020885
190706
Gammaproteobacteria
ACG
Arg
>WENV170703271
LKMJ01008780
451238
Gammaproteobacteria
GCC
Gly
>WENV170703159
LKMJ01007327
74339
Gammaproteobacteria
GAG
Leu
>WENV170703272
LKMJ01008780
508107
Gammaproteobacteria
GCA
Cys
>WENV170702756
LKMJ01004018
280812
Gammaproteobacteria
GAA
Phe
>WENV170703067
LKMJ01006211
280812
Gammaproteobacteria
GAA
Phe
>WENV170703604
LKMJ01014454
140800
Gammaproteobacteria
GTA
Tyr
>WENV170703516
LKMJ01013044
140800
Gammaproteobacteria
GTA
Tyr
>WENV170703804
LKMJ01016981
481325
Gammaproteobacteria
TCC
Gly
>WENV170703714
LKMJ01015932
207735
Gammaproteobacteria
GAC
Val
>WENV170702666
LKMJ01003427
242775
Gammaproteobacteria
TGG
Pro
>WENV170702075
LKMJ01000451
63431
Gammaproteobacteria
GGA
Ser
>WENV170703833
LKMJ01017176
201377
Gammaproteobacteria
TGG
Pro
>WENV170703195
LKMJ01007833
201377
Gammaproteobacteria
TGG
Pro
>WENV170703957
LKMJ01019695
176518
Gammaproteobacteria
CAT
Met
>WENV170703518
LKMJ01013044
296808
Gammaproteobacteria
GGT
Thr
>WENV170703606
LKMJ01014454
296808
Gammaproteobacteria
GGT
Thr
>WENV170703517
LKMJ01013044
408063
Gammaproteobacteria
TCC
Gly
>WENV170703605
LKMJ01014454
408063
Gammaproteobacteria
TCC
Gly
>WENV170702470
LKMJ01002127
400928
Gammaproteobacteria
>WENV170702992
LKMJ01005311
184457
Gammaproteobacteria
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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