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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180041109
LLBZ010045213
184097
Alphaproteobacteria
CCT
Arg
>WENV180040864
LLBZ010018603
289945
Alphaproteobacteria
TTC
Glu
>WENV180041041
LLBZ010037046
400695
Alphaproteobacteria
TTC
Glu
>WENV180040713
LLBZ010008500
225944
Alphaproteobacteria
CCT
Arg
>WENV180041437
LLBZ010133746
233059
Alphaproteobacteria
TCT
Arg
>WENV180040737
LLBZ010009862
100353
Alphaproteobacteria
GTA
Tyr
>WENV180041120
LLBZ010047134
303339
Alphaproteobacteria
GGC
Ala
>WENV180041014
LLBZ010034045
282748
Alphaproteobacteria
CGT
Thr
>WENV180041307
LLBZ010091197
100096
Alphaproteobacteria
TAA
Leu
>WENV180040663
LLBZ010005284
399340
Alphaproteobacteria
GTT
Asn
>WENV180040698
LLBZ010007469
287439
Alphaproteobacteria
CCA
Trp
>WENV180040741
LLBZ010010250
431636
Alphaproteobacteria
CTC
Glu
>WENV180041004
LLBZ010033269
408543
Alphaproteobacteria
GAC
Val
>WENV180041178
LLBZ010059016
140932
Alphaproteobacteria
>WENV180040789
LLBZ010014703
281409
Alphaproteobacteria
TTT
Lys
>WENV180041722
LLBZ010343884
398998
Alphaproteobacteria
TTG
Gln
>WENV180040904
LLBZ010022338
282660
Alphaproteobacteria
CGC
Ala
>WENV180041130
LLBZ010049520
398994
Alphaproteobacteria
GTT
Asn
>WENV180040895
LLBZ010021921
480900
Alphaproteobacteria
GCA
Cys
>WENV180040939
LLBZ010026323
480900
Alphaproteobacteria
GCA
Cys
>WENV180041243
LLBZ010073609
480900
Alphaproteobacteria
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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