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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704970
LLEO01000111
77412
Alphaproteobacteria
CAG
Leu
>WENV170705014
LLEO01001482
73490
Alphaproteobacteria
GAG
Leu
>WENV170704958
LLEO01000033
400384
Alphaproteobacteria
TTC
Glu
>WENV170704959
LLEO01000033
400384
Alphaproteobacteria
TTC
Glu
>WENV170704952
LLEO01000016
180029
Alphaproteobacteria
CAT
Met
>WENV170704971
LLEO01000114
178509
Alphaproteobacteria
CCT
Arg
>WENV170704983
LLEO01000222
179386
Alphaproteobacteria
TCT
Arg
>WENV170704968
LLEO01000099
435083
Alphaproteobacteria
>WENV170704977
LLEO01000169
178503
Alphaproteobacteria
GGG
Pro
>WENV170704969
LLEO01000101
29701
Alphaproteobacteria
CGA
Ser
>WENV170704957
LLEO01000032
118213
Alphaproteobacteria
TAG
Leu
>WENV170704975
LLEO01000157
283256
Alphaproteobacteria
CGT
Thr
>WENV170704943
LLEO01000001
178728
Alphaproteobacteria
CGG
Pro
>WENV170704987
LLEO01000268
398994
Alphaproteobacteria
GTT
Asn
>WENV170704954
LLEO01000027
283257
Alphaproteobacteria
TTT
Lys
>WENV170705005
LLEO01000724
305449
Alphaproteobacteria
CGT
Thr
>WENV170704947
LLEO01000013
30763
Alphaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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