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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170705066
LLEP01000008
73490
Alphaproteobacteria
GAG
Leu
>WENV170705076
LLEP01000017
305449
Alphaproteobacteria
CGT
Thr
>WENV170705086
LLEP01000063
73490
Alphaproteobacteria
GAG
Leu
>WENV170705088
LLEP01000074
183628
Alphaproteobacteria
CCG
Arg
>WENV170705099
LLEP01000447
73490
Alphaproteobacteria
GAG
Leu
>WENV170705108
LLEP01001656
183628
Alphaproteobacteria
CCG
Arg
>WENV170705132
LLEP01005108
335303
Alphaproteobacteria
TGC
Ala
>WENV170705154
LLEP01011341
281676
Alphaproteobacteria
TAC
Val
>WENV170705155
LLEP01011860
178510
Alphaproteobacteria
ACG
Arg
>WENV170705157
LLEP01012633
209809
Alphaproteobacteria
CCT
Arg
>WENV170705169
LLEP01015203
29495
Alphaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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