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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
109 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170706400
LNAP01002842
194696
Alphaproteobacteria
TCG
Arg
>WENV170706531
LNAP01003976
194696
Alphaproteobacteria
TCG
Arg
>WENV170706851
LNAP01007542
194696
Alphaproteobacteria
TCG
Arg
>WENV170707416
LNAP01020032
8684
Alphaproteobacteria
GCT
Ser
>WENV170706887
LNAP01008366
413566
Alphaproteobacteria
TTG
Gln
>WENV170708312
LNAP01068488
208947
Alphaproteobacteria
CAT
Met
>WENV170708419
LNAP01079717
334086
Alphaproteobacteria
GGC
Ala
>WENV170705756
LNAP01000203
400216
Alphaproteobacteria
TTG
Gln
>WENV170706124
LNAP01001234
400216
Alphaproteobacteria
TTG
Gln
>WENV170706148
LNAP01001376
400216
Alphaproteobacteria
TTG
Gln
>WENV170706187
LNAP01001572
402731
Alphaproteobacteria
TTG
Gln
>WENV170706524
LNAP01003903
188085
Alphaproteobacteria
GTC
Asp
>WENV170706110
LNAP01001170
320067
Alphaproteobacteria
CGC
Ala
>WENV170706113
LNAP01001183
320067
Alphaproteobacteria
CGC
Ala
>WENV170706483
LNAP01003451
320067
Alphaproteobacteria
CGC
Ala
>WENV170706886
LNAP01008309
320067
Alphaproteobacteria
CGC
Ala
>WENV170706921
LNAP01009046
283559
Alphaproteobacteria
CGC
Ala
>WENV170707209
LNAP01015124
180024
Alphaproteobacteria
TAC
Val
>WENV170707470
LNAP01021965
180024
Alphaproteobacteria
TAC
Val
>WENV170706686
LNAP01005578
100383
Alphaproteobacteria
GTA
Tyr
>WENV170705633
LNAP01000036
282966
Alphaproteobacteria
TTT
Lys
>WENV170706021
LNAP01000861
228733
Alphaproteobacteria
GTC
Asp
>WENV170706812
LNAP01007103
118147
Alphaproteobacteria
CAA
Leu
>WENV170707098
LNAP01012683
118147
Alphaproteobacteria
CAA
Leu
>WENV170707201
LNAP01015056
159537
Alphaproteobacteria
GGG
Pro
>WENV170705853
LNAP01000495
193088
Alphaproteobacteria
GAT
Ile
>WENV170708418
LNAP01079707
100353
Alphaproteobacteria
GTA
Tyr
>WENV170706606
LNAP01004590
156124
Alphaproteobacteria
GGG
Pro
>WENV170705620
LNAP01000024
400223
Alphaproteobacteria
GGT
Thr
>WENV170706081
LNAP01001046
400223
Alphaproteobacteria
GGT
Thr
>WENV170706434
LNAP01003131
400223
Alphaproteobacteria
GGT
Thr
>WENV170707006
LNAP01010782
180025
Alphaproteobacteria
TCT
Arg
>WENV170707533
LNAP01024162
180025
Alphaproteobacteria
TCT
Arg
>WENV170708070
LNAP01047791
180025
Alphaproteobacteria
TCT
Arg
>WENV170708204
LNAP01058463
180025
Alphaproteobacteria
TCT
Arg
>WENV170707665
LNAP01028897
336350
Alphaproteobacteria
GAA
Phe
>WENV170707907
LNAP01039052
305403
Alphaproteobacteria
>WENV170706570
LNAP01004313
400214
Alphaproteobacteria
>WENV170706132
LNAP01001273
46889
Alphaproteobacteria
TAA
Leu
>WENV170706929
LNAP01009106
73440
Alphaproteobacteria
CAG
Leu
>WENV170706955
LNAP01009708
73440
Alphaproteobacteria
CAG
Leu
>WENV170707407
LNAP01019740
73440
Alphaproteobacteria
CAG
Leu
>WENV170707893
LNAP01038097
73440
Alphaproteobacteria
CAG
Leu
>WENV170706133
LNAP01001275
400222
Alphaproteobacteria
GCC
Gly
>WENV170706221
LNAP01001732
400222
Alphaproteobacteria
GCC
Gly
>WENV170706764
LNAP01006325
400222
Alphaproteobacteria
GCC
Gly
>WENV170708397
LNAP01077943
118277
Alphaproteobacteria
TAG
Leu
>WENV170706139
LNAP01001317
118146
Alphaproteobacteria
GAG
Leu
>WENV170706730
LNAP01005918
118146
Alphaproteobacteria
GAG
Leu
>WENV170707179
LNAP01014498
118146
Alphaproteobacteria
GAG
Leu
>WENV170707636
LNAP01028063
118146
Alphaproteobacteria
GAG
Leu
>WENV170705920
LNAP01000619
178239
Alphaproteobacteria
TAC
Val
>WENV170706639
LNAP01005019
49321
Alphaproteobacteria
TAA
Leu
>WENV170707254
LNAP01016186
401165
Alphaproteobacteria
CAC
Val
>WENV170707564
LNAP01025511
401165
Alphaproteobacteria
CAC
Val
>WENV170708042
LNAP01046028
401165
Alphaproteobacteria
CAC
Val
>WENV170706107
LNAP01001139
289463
Alphaproteobacteria
CAT
Met
>WENV170705849
LNAP01000483
399879
Alphaproteobacteria
GTT
Asn
>WENV170706188
LNAP01001589
284847
Alphaproteobacteria
TTT
Lys
>WENV170707312
LNAP01017079
284847
Alphaproteobacteria
TTT
Lys
>WENV170706180
LNAP01001556
282960
Alphaproteobacteria
CCA
Trp
>WENV170706399
LNAP01002834
282960
Alphaproteobacteria
CCA
Trp
>WENV170706633
LNAP01004942
282960
Alphaproteobacteria
CCA
Trp
>WENV170705632
LNAP01000036
29653
Alphaproteobacteria
TGA
Ser
>WENV170708280
LNAP01065155
179883
Alphaproteobacteria
CCA
Trp
>WENV170706701
LNAP01005713
282749
Alphaproteobacteria
CGC
Ala
>WENV170707616
LNAP01027412
399239
Alphaproteobacteria
CAC
Val
>WENV170706473
LNAP01003364
404744
Alphaproteobacteria
GCC
Gly
>WENV170706589
LNAP01004468
404744
Alphaproteobacteria
GCC
Gly
>WENV170705848
LNAP01000483
480960
Alphaproteobacteria
GCA
Cys
>WENV170707675
LNAP01029168
402067
Alphaproteobacteria
GCC
Gly
>WENV170705900
LNAP01000598
419842
Alphaproteobacteria
GCC
Gly
>WENV170707455
LNAP01021312
419842
Alphaproteobacteria
GCC
Gly
>WENV170708429
LNAP01080505
419842
Alphaproteobacteria
GCC
Gly
>WENV170705611
LNAP01000019
33393
Alphaproteobacteria
TGA
Ser
>WENV170706800
LNAP01006865
33393
Alphaproteobacteria
TGA
Ser
>WENV170705780
LNAP01000271
178240
Alphaproteobacteria
GTC
Asp
>WENV170705830
LNAP01000421
334158
Alphaproteobacteria
CTT
Lys
>WENV170705623
LNAP01000026
195597
Alphaproteobacteria
GGG
Pro
>WENV170705935
LNAP01000679
178252
Alphaproteobacteria
TGG
Pro
>WENV170706669
LNAP01005321
178252
Alphaproteobacteria
TGG
Pro
>WENV170706932
LNAP01009174
178252
Alphaproteobacteria
TGG
Pro
>WENV170705922
LNAP01000622
180026
Alphaproteobacteria
CCT
Arg
>WENV170706202
LNAP01001657
180026
Alphaproteobacteria
CCT
Arg
>WENV170707332
LNAP01017773
180026
Alphaproteobacteria
CCT
Arg
>WENV170705697
LNAP01000143
399210
Alphaproteobacteria
CAT
Met
>WENV170706314
LNAP01001998
481768
Alphaproteobacteria
GCA
Cys
>WENV170706905
LNAP01008749
481768
Alphaproteobacteria
GCA
Cys
>WENV170706770
LNAP01006382
127573
Alphaproteobacteria
GTA
Tyr
>WENV170706131
LNAP01001271
415537
Alphaproteobacteria
>WENV170706520
LNAP01003850
415537
Alphaproteobacteria
>WENV170707552
LNAP01025171
415537
Alphaproteobacteria
>WENV170706099
LNAP01001095
29652
Alphaproteobacteria
CGA
Ser
>WENV170706279
LNAP01001832
29652
Alphaproteobacteria
CGA
Ser
>WENV170706966
LNAP01010005
176633
Alphaproteobacteria
GAT
Ile
>WENV170706378
LNAP01002639
296763
Alphaproteobacteria
CCA
Trp
>WENV170706494
LNAP01003565
404182
Alphaproteobacteria
CAC
Val
>WENV170706560
LNAP01004210
404054
Alphaproteobacteria
CAC
Val
>WENV170705757
LNAP01000207
35980
Alphaproteobacteria
CGA
Ser
>WENV170705919
LNAP01000619
118145
Alphaproteobacteria
TAG
Leu
>WENV170707469
LNAP01021965
118145
Alphaproteobacteria
TAG
Leu
>WENV170708379
LNAP01075372
118145
Alphaproteobacteria
TAG
Leu
>WENV170707607
LNAP01027167
403890
Alphaproteobacteria
GAC
Val
>WENV170707105
LNAP01012768
403890
Alphaproteobacteria
GAC
Val
>WENV170706621
LNAP01004810
403890
Alphaproteobacteria
GAC
Val
>WENV170706023
LNAP01000868
180027
Alphaproteobacteria
CAT
Met
>WENV170707060
LNAP01011965
180027
Alphaproteobacteria
CAT
Met
>WENV170706569
LNAP01004305
480958
Alphaproteobacteria
CTG
Gln
>WENV170706977
LNAP01010207
480958
Alphaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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