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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170711468
LNFM01005384
402723
Gammaproteobacteria
TTG
Gln
>WENV170712431
LNFM01013283
198275
Gammaproteobacteria
TCT
Arg
>WENV170710648
LNFM01002293
31324
Gammaproteobacteria
GGA
Ser
>WENV170711438
LNFM01005230
176243
Gammaproteobacteria
CCG
Arg
>WENV170712476
LNFM01013795
176243
Gammaproteobacteria
CCG
Arg
>WENV170715045
LNFM01128067
176243
Gammaproteobacteria
CCG
Arg
>WENV170710786
LNFM01002638
401696
Gammaproteobacteria
TTG
Gln
>WENV170710787
LNFM01002638
401696
Gammaproteobacteria
TTG
Gln
>WENV170714180
LNFM01059364
9062
Gammaproteobacteria
GCT
Ser
>WENV170709693
LNFM01000593
176069
Gammaproteobacteria
TCT
Arg
>WENV170711226
LNFM01004115
299227
Gammaproteobacteria
GTT
Asn
>WENV170709867
LNFM01000825
299227
Gammaproteobacteria
GTT
Asn
>WENV170709612
LNFM01000532
197506
Gammaproteobacteria
CAT
Met
>WENV170710317
LNFM01001524
197506
Gammaproteobacteria
CAT
Met
>WENV170709509
LNFM01000408
99884
Gammaproteobacteria
GAG
Leu
>WENV170709339
LNFM01000268
30633
Gammaproteobacteria
GGA
Ser
>WENV170713355
LNFM01029240
289050
Gammaproteobacteria
CCA
Trp
>WENV170714085
LNFM01053384
289050
Gammaproteobacteria
CCA
Trp
>WENV170710617
LNFM01002201
402281
Gammaproteobacteria
GCC
Gly
>WENV170710696
LNFM01002408
176241
Gammaproteobacteria
CGG
Pro
>WENV170710826
LNFM01002754
176241
Gammaproteobacteria
CGG
Pro
>WENV170714030
LNFM01051369
303413
Gammaproteobacteria
GGT
Thr
>WENV170713974
LNFM01048943
122552
Gammaproteobacteria
GAG
Leu
>WENV170712604
LNFM01015383
296761
Gammaproteobacteria
GGT
Thr
>WENV170711630
LNFM01006158
296761
Gammaproteobacteria
GGT
Thr
>WENV170713004
LNFM01022159
118414
Gammaproteobacteria
TAG
Leu
>WENV170713417
LNFM01030587
118414
Gammaproteobacteria
TAG
Leu
>WENV170709499
LNFM01000395
186418
Gammaproteobacteria
GTC
Asp
>WENV170710476
LNFM01001848
186418
Gammaproteobacteria
GTC
Asp
>WENV170714182
LNFM01059364
178325
Gammaproteobacteria
TGG
Pro
>WENV170714935
LNFM01117148
176301
Gammaproteobacteria
GAT
Ile
>WENV170711077
LNFM01003450
178830
Gammaproteobacteria
CAT
Met
>WENV170709437
LNFM01000343
198082
Gammaproteobacteria
ACG
Arg
>WENV170713166
LNFM01025361
400083
Gammaproteobacteria
CAC
Val
>WENV170713414
LNFM01030587
184382
Gammaproteobacteria
TCT
Arg
>WENV170713332
LNFM01028606
73819
Gammaproteobacteria
CAG
Leu
>WENV170709566
LNFM01000478
179613
Gammaproteobacteria
CAT
Met
>WENV170711496
LNFM01005528
179613
Gammaproteobacteria
CAT
Met
>WENV170712011
LNFM01009076
29670
Gammaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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