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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180042156
LNFX01001121
317362
Gammaproteobacteria
GGC
Ala
>WENV180042179
LNFX01002340
401883
Gammaproteobacteria
TTG
Gln
>WENV180042125
LNFX01000161
141225
Gammaproteobacteria
GTA
Tyr
>WENV180042140
LNFX01000494
287168
Gammaproteobacteria
TAC
Val
>WENV180042146
LNFX01000660
287168
Gammaproteobacteria
TAC
Val
>WENV180042164
LNFX01001444
287168
Gammaproteobacteria
TAC
Val
>WENV180042178
LNFX01002340
118920
Gammaproteobacteria
TAG
Leu
>WENV180042127
LNFX01000161
290045
Gammaproteobacteria
GGT
Thr
>WENV180042135
LNFX01000387
181365
Gammaproteobacteria
CAT
Met
>WENV180042129
LNFX01000216
356476
Gammaproteobacteria
TTT
Lys
>WENV180042120
LNFX01000011
371341
Gammaproteobacteria
GTT
Asn
>WENV180042122
LNFX01000035
208382
Gammaproteobacteria
ACG
Arg
>WENV180042207
LNFX01004612
208382
Gammaproteobacteria
ACG
Arg
>WENV180042145
LNFX01000660
290048
Gammaproteobacteria
TGT
Thr
>WENV180042191
LNFX01003478
290048
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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