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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180042374
LQAE01009152
439135
Alphaproteobacteria
CAC
Val
>WENV180042346
LQAE01003737
77412
Alphaproteobacteria
CAG
Leu
>WENV180042398
LQAE01014107
73490
Alphaproteobacteria
GAG
Leu
>WENV180042367
LQAE01007086
179388
Alphaproteobacteria
GTG
His
>WENV180042342
LQAE01002742
398994
Alphaproteobacteria
GTT
Asn
>WENV180042375
LQAE01009152
281676
Alphaproteobacteria
TAC
Val
>WENV180042388
LQAE01012707
179386
Alphaproteobacteria
TCT
Arg
>WENV180042424
LQAE01018443
400384
Alphaproteobacteria
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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