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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180042571
LQAF01006219
125232
Gammaproteobacteria
TAG
Leu
>WENV180042591
LQAF01010102
307138
Gammaproteobacteria
TGT
Thr
>WENV180042596
LQAF01010297
284693
Gammaproteobacteria
TTC
Glu
>WENV180042637
LQAF01016284
313852
Gammaproteobacteria
TTC
Glu
>WENV180042644
LQAF01016547
313852
Gammaproteobacteria
TTC
Glu
>WENV180042523
LQAF01001288
280812
Gammaproteobacteria
GAA
Phe
>WENV180042630
LQAF01015467
209813
Gammaproteobacteria
GAT
Ile
>WENV180042558
LQAF01004998
56372
Gammaproteobacteria
GGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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