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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180043185
LQAH01008349
140963
Alphaproteobacteria
>WENV180043247
LQAH01014882
481268
Alphaproteobacteria
TCC
Gly
>WENV180043102
LQAH01002158
399480
Alphaproteobacteria
GAA
Phe
>WENV180043179
LQAH01007078
399480
Alphaproteobacteria
GAA
Phe
>WENV180043070
LQAH01001055
400384
Alphaproteobacteria
TTC
Glu
>WENV180043091
LQAH01001857
180029
Alphaproteobacteria
CAT
Met
>WENV180043250
LQAH01015870
180029
Alphaproteobacteria
CAT
Met
>WENV180043216
LQAH01011042
340918
Alphaproteobacteria
CGT
Thr
>WENV180043349
LQAH01034132
179386
Alphaproteobacteria
TCT
Arg
>WENV180043274
LQAH01019669
178503
Alphaproteobacteria
GGG
Pro
>WENV180043087
LQAH01001742
400515
Alphaproteobacteria
GAC
Val
>WENV180043080
LQAH01001495
179720
Alphaproteobacteria
TGG
Pro
>WENV180043336
LQAH01031889
281676
Alphaproteobacteria
TAC
Val
>WENV180043267
LQAH01018197
400386
Alphaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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