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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170729360
LULF01028212
178510
Alphaproteobacteria
ACG
Arg
>WENV170728751
LULF01000412
296698
Alphaproteobacteria
CGC
Ala
>WENV170729186
LULF01013276
446430
Alphaproteobacteria
CAC
Val
>WENV170728816
LULF01001073
481048
Alphaproteobacteria
GCA
Cys
>WENV170729248
LULF01017589
29841
Alphaproteobacteria
GGA
Ser
>WENV170729280
LULF01021119
140876
Alphaproteobacteria
>WENV170728960
LULF01003532
179390
Alphaproteobacteria
TGG
Pro
>WENV170728674
LULF01000123
193463
Alphaproteobacteria
CCT
Arg
>WENV170728724
LULF01000313
20437
Alphaproteobacteria
GGA
Ser
>WENV170729321
LULF01024487
201940
Alphaproteobacteria
CAT
Met
>WENV170728654
LULF01000055
201940
Alphaproteobacteria
CAT
Met
>WENV170728798
LULF01000889
481802
Alphaproteobacteria
TCC
Gly
>WENV170728945
LULF01003262
481073
Alphaproteobacteria
CTG
Gln
>WENV170729289
LULF01021749
73490
Alphaproteobacteria
GAG
Leu
>WENV170729413
LULF01032987
399480
Alphaproteobacteria
GAA
Phe
>WENV170729469
LULF01038905
399480
Alphaproteobacteria
GAA
Phe
>WENV170729364
LULF01028796
400384
Alphaproteobacteria
TTC
Glu
>WENV170728935
LULF01003070
282977
Alphaproteobacteria
CAT
Met
>WENV170729342
LULF01025806
340918
Alphaproteobacteria
CGT
Thr
>WENV170728696
LULF01000191
427571
Alphaproteobacteria
GCC
Gly
>WENV170729466
LULF01038591
29729
Alphaproteobacteria
GCT
Ser
>WENV170728687
LULF01000154
192131
Alphaproteobacteria
GTC
Asp
>WENV170728907
LULF01002419
481074
Alphaproteobacteria
TCC
Gly
>WENV170729345
LULF01026035
229285
Alphaproteobacteria
GGG
Pro
>WENV170729274
LULF01020597
368481
Alphaproteobacteria
TGC
Ala
>WENV170729071
LULF01007027
221998
Alphaproteobacteria
GAT
Ile
>WENV170728818
LULF01001090
118247
Alphaproteobacteria
CAA
Leu
>WENV170729046
LULF01006058
29701
Alphaproteobacteria
CGA
Ser
>WENV170728976
LULF01003832
400419
Alphaproteobacteria
TTG
Gln
>WENV170728790
LULF01000749
29655
Alphaproteobacteria
TGA
Ser
>WENV170729107
LULF01008076
400544
Alphaproteobacteria
GGT
Thr
>WENV170728667
LULF01000106
400517
Alphaproteobacteria
GGT
Thr
>WENV170729273
LULF01020571
281650
Alphaproteobacteria
CCA
Trp
>WENV170728815
LULF01001062
286018
Alphaproteobacteria
CCA
Trp
>WENV170729178
LULF01012660
453762
Alphaproteobacteria
CAC
Val
>WENV170729052
LULF01006206
422170
Alphaproteobacteria
GGT
Thr
>WENV170729532
LULF01047050
400515
Alphaproteobacteria
GAC
Val
>WENV170729483
LULF01040821
398994
Alphaproteobacteria
GTT
Asn
>WENV170728653
LULF01000052
282981
Alphaproteobacteria
CCA
Trp
>WENV170729430
LULF01035055
178507
Alphaproteobacteria
GTG
His
>WENV170729581
LULF01057492
121990
Alphaproteobacteria
TAG
Leu
>WENV170728731
LULF01000324
480900
Alphaproteobacteria
GCA
Cys
>WENV170729260
LULF01019314
398996
Alphaproteobacteria
GCC
Gly
>WENV170729181
LULF01013009
178576
Alphaproteobacteria
ACG
Arg
>WENV170728704
LULF01000208
118150
Alphaproteobacteria
TAG
Leu
>WENV170729055
LULF01006348
118150
Alphaproteobacteria
TAG
Leu
>WENV170728914
LULF01002561
283257
Alphaproteobacteria
TTT
Lys
>WENV170728713
LULF01000250
73523
Alphaproteobacteria
CAG
Leu
>WENV170729125
LULF01009570
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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