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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170729670
LULG01000205
288727
Alphaproteobacteria
>WENV170729692
LULG01000341
178576
Alphaproteobacteria
ACG
Arg
>WENV170729726
LULG01000666
29655
Alphaproteobacteria
TGA
Ser
>WENV170729751
LULG01000879
481074
Alphaproteobacteria
TCC
Gly
>WENV170729760
LULG01000934
481073
Alphaproteobacteria
CTG
Gln
>WENV170729885
LULG01003293
400517
Alphaproteobacteria
GGT
Thr
>WENV170729923
LULG01004046
481048
Alphaproteobacteria
GCA
Cys
>WENV170729934
LULG01004274
118247
Alphaproteobacteria
CAA
Leu
>WENV170729944
LULG01004625
480900
Alphaproteobacteria
GCA
Cys
>WENV170729968
LULG01005259
400419
Alphaproteobacteria
TTG
Gln
>WENV170729974
LULG01005409
282977
Alphaproteobacteria
CAT
Met
>WENV170730028
LULG01007788
118150
Alphaproteobacteria
TAG
Leu
>WENV170730034
LULG01008167
192131
Alphaproteobacteria
GTC
Asp
>WENV170730292
LULG01029586
296698
Alphaproteobacteria
CGC
Ala
>WENV170730336
LULG01035981
221998
Alphaproteobacteria
GAT
Ile
>WENV170730338
LULG01036291
20437
Alphaproteobacteria
GGA
Ser
>WENV170730426
LULG01050119
178731
Alphaproteobacteria
GTC
Asp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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