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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170732412
LULI01048243
360947
Alphaproteobacteria
TTT
Lys
>WENV170732280
LULI01029297
481048
Alphaproteobacteria
GCA
Cys
>WENV170732102
LULI01014742
424450
Alphaproteobacteria
GGT
Thr
>WENV170731329
LULI01000040
193463
Alphaproteobacteria
CCT
Arg
>WENV170731308
LULI01000009
20437
Alphaproteobacteria
GGA
Ser
>WENV170732337
LULI01035497
20437
Alphaproteobacteria
GGA
Ser
>WENV170732209
LULI01022877
201940
Alphaproteobacteria
CAT
Met
>WENV170731332
LULI01000047
201940
Alphaproteobacteria
CAT
Met
>WENV170731419
LULI01000233
481802
Alphaproteobacteria
TCC
Gly
>WENV170732322
LULI01034307
481073
Alphaproteobacteria
CTG
Gln
>WENV170732296
LULI01031591
197241
Alphaproteobacteria
GGG
Pro
>WENV170732427
LULI01050738
314617
Alphaproteobacteria
TAC
Val
>WENV170732330
LULI01034870
75222
Alphaproteobacteria
GAG
Leu
>WENV170731446
LULI01000365
282977
Alphaproteobacteria
CAT
Met
>WENV170731697
LULI01002138
427571
Alphaproteobacteria
GCC
Gly
>WENV170731391
LULI01000150
192131
Alphaproteobacteria
GTC
Asp
>WENV170731963
LULI01008891
435083
Alphaproteobacteria
>WENV170732314
LULI01033559
100184
Alphaproteobacteria
CAG
Leu
>WENV170732212
LULI01022984
118247
Alphaproteobacteria
CAA
Leu
>WENV170731418
LULI01000233
400517
Alphaproteobacteria
GGT
Thr
>WENV170732009
LULI01010658
422170
Alphaproteobacteria
GGT
Thr
>WENV170731335
LULI01000051
282981
Alphaproteobacteria
CCA
Trp
>WENV170732117
LULI01015348
353624
Alphaproteobacteria
CCA
Trp
>WENV170731478
LULI01000501
480900
Alphaproteobacteria
GCA
Cys
>WENV170731320
LULI01000018
118150
Alphaproteobacteria
TAG
Leu
>WENV170732230
LULI01024605
118150
Alphaproteobacteria
TAG
Leu
>WENV170731383
LULI01000125
73523
Alphaproteobacteria
CAG
Leu
>WENV170732433
LULI01052296
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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