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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170732726
LULJ01000734
435083
Alphaproteobacteria
>WENV170732822
LULJ01001364
145377
Alphaproteobacteria
>WENV170732463
LULJ01000023
178576
Alphaproteobacteria
ACG
Arg
>WENV170732464
LULJ01000023
118247
Alphaproteobacteria
CAA
Leu
>WENV170733037
LULJ01003813
73523
Alphaproteobacteria
CAG
Leu
>WENV170732821
LULJ01001359
201940
Alphaproteobacteria
CAT
Met
>WENV170732577
LULJ01000137
286018
Alphaproteobacteria
CCA
Trp
>WENV170732790
LULJ01001114
282981
Alphaproteobacteria
CCA
Trp
>WENV170733614
LULJ01036139
353624
Alphaproteobacteria
CCA
Trp
>WENV170732873
LULJ01001743
353624
Alphaproteobacteria
CCA
Trp
>WENV170732943
LULJ01002503
193463
Alphaproteobacteria
CCT
Arg
>WENV170732923
LULJ01002185
481073
Alphaproteobacteria
CTG
Gln
>WENV170733609
LULJ01035078
195438
Alphaproteobacteria
GAT
Ile
>WENV170732759
LULJ01000854
481048
Alphaproteobacteria
GCA
Cys
>WENV170733451
LULJ01019955
480900
Alphaproteobacteria
GCA
Cys
>WENV170732808
LULJ01001259
427571
Alphaproteobacteria
GCC
Gly
>WENV170733401
LULJ01017032
29495
Alphaproteobacteria
GCT
Ser
>WENV170732983
LULJ01003064
20437
Alphaproteobacteria
GGA
Ser
>WENV170733124
LULJ01005773
424450
Alphaproteobacteria
GGT
Thr
>WENV170732767
LULJ01000947
400517
Alphaproteobacteria
GGT
Thr
>WENV170732884
LULJ01001858
422170
Alphaproteobacteria
GGT
Thr
>WENV170732976
LULJ01002938
192131
Alphaproteobacteria
GTC
Asp
>WENV170733067
LULJ01004302
212319
Alphaproteobacteria
GTG
His
>WENV170733491
LULJ01022709
314617
Alphaproteobacteria
TAC
Val
>WENV170732470
LULJ01000026
118150
Alphaproteobacteria
TAG
Leu
>WENV170732799
LULJ01001186
481802
Alphaproteobacteria
TCC
Gly
>WENV170732842
LULJ01001477
481268
Alphaproteobacteria
TCC
Gly
>WENV170732481
LULJ01000026
481074
Alphaproteobacteria
TCC
Gly
>WENV170732476
LULJ01000026
29655
Alphaproteobacteria
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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