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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170735462
LULL01002155
102146
Alphaproteobacteria
GTA
Tyr
>WENV170735491
LULL01002692
29655
Alphaproteobacteria
TGA
Ser
>WENV170735542
LULL01003756
481802
Alphaproteobacteria
TCC
Gly
>WENV170735557
LULL01004006
283257
Alphaproteobacteria
TTT
Lys
>WENV170735563
LULL01004205
400419
Alphaproteobacteria
TTG
Gln
>WENV170735579
LULL01004537
422170
Alphaproteobacteria
GGT
Thr
>WENV170735580
LULL01004537
22052
Alphaproteobacteria
GGA
Ser
>WENV170735583
LULL01004645
282977
Alphaproteobacteria
CAT
Met
>WENV170735608
LULL01005396
210458
Alphaproteobacteria
CGG
Pro
>WENV170735639
LULL01006702
210530
Alphaproteobacteria
CGG
Pro
>WENV170735649
LULL01007024
192131
Alphaproteobacteria
GTC
Asp
>WENV170735658
LULL01007227
481073
Alphaproteobacteria
CTG
Gln
>WENV170735664
LULL01007438
73523
Alphaproteobacteria
CAG
Leu
>WENV170735705
LULL01008601
398981
Alphaproteobacteria
GTT
Asn
>WENV170735710
LULL01008743
427571
Alphaproteobacteria
GCC
Gly
>WENV170735732
LULL01009999
118247
Alphaproteobacteria
CAA
Leu
>WENV170735738
LULL01010486
197241
Alphaproteobacteria
GGG
Pro
>WENV170735756
LULL01011474
481048
Alphaproteobacteria
GCA
Cys
>WENV170735770
LULL01012048
29495
Alphaproteobacteria
GCT
Ser
>WENV170735776
LULL01012325
400517
Alphaproteobacteria
GGT
Thr
>WENV170735810
LULL01013808
193463
Alphaproteobacteria
CCT
Arg
>WENV170735856
LULL01017622
118150
Alphaproteobacteria
TAG
Leu
>WENV170735857
LULL01017757
308662
Alphaproteobacteria
GAA
Phe
>WENV170735860
LULL01017873
179386
Alphaproteobacteria
TCT
Arg
>WENV170735880
LULL01018869
118150
Alphaproteobacteria
TAG
Leu
>WENV170735885
LULL01019219
179390
Alphaproteobacteria
TGG
Pro
>WENV170735899
LULL01020420
77412
Alphaproteobacteria
CAG
Leu
>WENV170735923
LULL01022986
178731
Alphaproteobacteria
GTC
Asp
>WENV170735964
LULL01026913
480900
Alphaproteobacteria
GCA
Cys
>WENV170736061
LULL01036882
286018
Alphaproteobacteria
CCA
Trp
>WENV170736062
LULL01036949
178576
Alphaproteobacteria
ACG
Arg
>WENV170736110
LULL01044684
140892
Alphaproteobacteria
TAG
Leu
>WENV170736121
LULL01046804
29841
Alphaproteobacteria
GGA
Ser
>WENV170736141
LULL01051053
178510
Alphaproteobacteria
ACG
Arg
>WENV170736152
LULL01054006
156125
Alphaproteobacteria
TCT
Arg
>WENV170736153
LULL01054050
314617
Alphaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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