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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170737413
LULO01000038
296698
Alphaproteobacteria
CGC
Ala
>WENV170737478
LULO01000225
481048
Alphaproteobacteria
GCA
Cys
>WENV170737950
LULO01008645
29841
Alphaproteobacteria
GGA
Ser
>WENV170737879
LULO01006372
140876
Alphaproteobacteria
>WENV170737403
LULO01000032
193463
Alphaproteobacteria
CCT
Arg
>WENV170737380
LULO01000004
20437
Alphaproteobacteria
GGA
Ser
>WENV170738297
LULO01043941
201940
Alphaproteobacteria
CAT
Met
>WENV170737471
LULO01000201
201940
Alphaproteobacteria
CAT
Met
>WENV170737440
LULO01000114
481802
Alphaproteobacteria
TCC
Gly
>WENV170737610
LULO01000946
481073
Alphaproteobacteria
CTG
Gln
>WENV170737945
LULO01008249
197241
Alphaproteobacteria
GGG
Pro
>WENV170738183
LULO01026053
481268
Alphaproteobacteria
TCC
Gly
>WENV170737383
LULO01000010
282977
Alphaproteobacteria
CAT
Met
>WENV170738167
LULO01023189
180029
Alphaproteobacteria
CAT
Met
>WENV170737451
LULO01000144
427571
Alphaproteobacteria
GCC
Gly
>WENV170737948
LULO01008549
178509
Alphaproteobacteria
CCT
Arg
>WENV170737394
LULO01000017
192131
Alphaproteobacteria
GTC
Asp
>WENV170737600
LULO01000905
481074
Alphaproteobacteria
TCC
Gly
>WENV170738025
LULO01012176
435083
Alphaproteobacteria
>WENV170737470
LULO01000191
118247
Alphaproteobacteria
CAA
Leu
>WENV170737476
LULO01000221
400419
Alphaproteobacteria
TTG
Gln
>WENV170737682
LULO01001576
29655
Alphaproteobacteria
TGA
Ser
>WENV170737439
LULO01000114
400517
Alphaproteobacteria
GGT
Thr
>WENV170737561
LULO01000681
286018
Alphaproteobacteria
CCA
Trp
>WENV170737526
LULO01000474
422170
Alphaproteobacteria
GGT
Thr
>WENV170737425
LULO01000068
282981
Alphaproteobacteria
CCA
Trp
>WENV170737416
LULO01000056
480900
Alphaproteobacteria
GCA
Cys
>WENV170737547
LULO01000637
178576
Alphaproteobacteria
ACG
Arg
>WENV170737418
LULO01000059
118150
Alphaproteobacteria
TAG
Leu
>WENV170737576
LULO01000783
118150
Alphaproteobacteria
TAG
Leu
>WENV170738124
LULO01019533
283257
Alphaproteobacteria
TTT
Lys
>WENV170738132
LULO01020215
283257
Alphaproteobacteria
TTT
Lys
>WENV170737437
LULO01000108
73523
Alphaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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