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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170739564
LULQ01003590
401934
Cyanobacteriota
GGT
Thr
>WENV170739345
LULQ01000347
480623
Cyanobacteriota
TCC
Gly
>WENV170739377
LULQ01000515
118720
Cyanobacteriota
CAA
Leu
>WENV170739402
LULQ01000822
285848
Cyanobacteriota
CAT
Met
>WENV170739509
LULQ01002485
30082
Cyanobacteriota
TGA
Ser
>WENV170739433
LULQ01001280
180925
Cyanobacteriota
ACG
Arg
>WENV170739355
LULQ01000422
401929
Cyanobacteriota
TTG
Gln
>WENV170739353
LULQ01000394
46946
Cyanobacteriota
TAA
Leu
>WENV170739852
LULQ01021434
283431
Cyanobacteriota
GTG
His
>WENV170739663
LULQ01006964
219114
Cyanobacteriota
GGG
Pro
>WENV170739408
LULQ01000946
177076
Cyanobacteriota
GTC
Asp
>WENV170739397
LULQ01000757
366263
Cyanobacteriota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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