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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170740457
LULR01010777
481073
Alphaproteobacteria
CTG
Gln
>WENV170740681
LULR01028616
400518
Alphaproteobacteria
GAA
Phe
>WENV170740526
LULR01014679
193088
Alphaproteobacteria
GAT
Ile
>WENV170740603
LULR01019731
102146
Alphaproteobacteria
GTA
Tyr
>WENV170740419
LULR01008518
221998
Alphaproteobacteria
GAT
Ile
>WENV170740298
LULR01004798
192275
Alphaproteobacteria
GTG
His
>WENV170740742
LULR01039319
481098
Alphaproteobacteria
CTG
Gln
>WENV170740631
LULR01022786
286018
Alphaproteobacteria
CCA
Trp
>WENV170740474
LULR01012008
234327
Alphaproteobacteria
GAT
Ile
>WENV170740700
LULR01030904
480900
Alphaproteobacteria
GCA
Cys
>WENV170740387
LULR01007733
29739
Alphaproteobacteria
CGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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