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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170740389
LULR01007744
73123
Gammaproteobacteria
CAA
Leu
>WENV170739939
LULR01000038
283283
Gammaproteobacteria
TAC
Val
>WENV170739940
LULR01000038
283283
Gammaproteobacteria
TAC
Val
>WENV170740065
LULR01000592
178164
Gammaproteobacteria
GAT
Ile
>WENV170740399
LULR01008070
281275
Gammaproteobacteria
TGT
Thr
>WENV170740008
LULR01000214
176662
Gammaproteobacteria
ACG
Arg
>WENV170739964
LULR01000072
178544
Gammaproteobacteria
CAT
Met
>WENV170740196
LULR01002615
120827
Gammaproteobacteria
GAG
Leu
>WENV170740007
LULR01000214
29834
Gammaproteobacteria
GCT
Ser
>WENV170739926
LULR01000014
481036
Gammaproteobacteria
GCA
Cys
>WENV170740075
LULR01000681
176520
Gammaproteobacteria
CAT
Met
>WENV170739951
LULR01000057
283282
Gammaproteobacteria
TTT
Lys
>WENV170740232
LULR01003327
229289
Gammaproteobacteria
TGG
Pro
>WENV170740003
LULR01000192
281282
Gammaproteobacteria
TTC
Glu
>WENV170740063
LULR01000574
281282
Gammaproteobacteria
TTC
Glu
>WENV170740119
LULR01001277
329164
Gammaproteobacteria
TTT
Lys
>WENV170740402
LULR01008122
329164
Gammaproteobacteria
TTT
Lys
>WENV170740434
LULR01009135
176663
Gammaproteobacteria
GGG
Pro
>WENV170739965
LULR01000072
118219
Gammaproteobacteria
TAG
Leu
>WENV170740324
LULR01005496
338424
Gammaproteobacteria
TAC
Val
>WENV170739923
LULR01000014
178543
Gammaproteobacteria
GGG
Pro
>WENV170739948
LULR01000048
280812
Gammaproteobacteria
GAA
Phe
>WENV170740539
LULR01015161
280812
Gammaproteobacteria
GAA
Phe
>WENV170739966
LULR01000072
400402
Gammaproteobacteria
TTG
Gln
>WENV170740140
LULR01001595
306288
Gammaproteobacteria
GCC
Gly
>WENV170740064
LULR01000574
306288
Gammaproteobacteria
GCC
Gly
>WENV170740050
LULR01000498
176664
Gammaproteobacteria
CCT
Arg
>WENV170740045
LULR01000466
346373
Gammaproteobacteria
GAA
Phe
>WENV170739941
LULR01000038
178549
Gammaproteobacteria
GTT
Asn
>WENV170739950
LULR01000055
196907
Gammaproteobacteria
GAC
Val
>WENV170739927
LULR01000014
73504
Gammaproteobacteria
TAA
Leu
>WENV170740428
LULR01008896
176301
Gammaproteobacteria
GAT
Ile
>WENV170740094
LULR01000949
176665
Gammaproteobacteria
CGG
Pro
>WENV170739961
LULR01000070
8609
Gammaproteobacteria
GCT
Ser
>WENV170740110
LULR01001117
23169
Gammaproteobacteria
GGA
Ser
>WENV170740659
LULR01026184
117788
Gammaproteobacteria
TAG
Leu
>WENV170740234
LULR01003327
281283
Gammaproteobacteria
GTG
His
>WENV170740636
LULR01023505
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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