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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170744227
LULX01000004
176662
Gammaproteobacteria
ACG
Arg
>WENV170744228
LULX01000004
176662
Gammaproteobacteria
ACG
Arg
>WENV170744864
LULX01016236
232119
Gammaproteobacteria
ACG
Arg
>WENV170744224
LULX01000001
73123
Gammaproteobacteria
CAA
Leu
>WENV170744292
LULX01000138
73502
Gammaproteobacteria
CAG
Leu
>WENV170744517
LULX01002447
180053
Gammaproteobacteria
CAT
Met
>WENV170744289
LULX01000138
178544
Gammaproteobacteria
CAT
Met
>WENV170744732
LULX01008314
176520
Gammaproteobacteria
CAT
Met
>WENV170744888
LULX01017681
176545
Gammaproteobacteria
CAT
Met
>WENV170744431
LULX01001219
176544
Gammaproteobacteria
CAT
Met
>WENV170744238
LULX01000012
176478
Gammaproteobacteria
CAT
Met
>WENV170744693
LULX01006539
180679
Gammaproteobacteria
CCA
Trp
>WENV170744758
LULX01009740
180678
Gammaproteobacteria
CCG
Arg
>WENV170744413
LULX01001023
305254
Gammaproteobacteria
CCT
Arg
>WENV170744580
LULX01003723
401684
Gammaproteobacteria
CCT
Arg
>WENV170744269
LULX01000078
176664
Gammaproteobacteria
CCT
Arg
>WENV170744294
LULX01000143
176665
Gammaproteobacteria
CGG
Pro
>WENV170744283
LULX01000107
280812
Gammaproteobacteria
GAA
Phe
>WENV170744801
LULX01012262
346373
Gammaproteobacteria
GAA
Phe
>WENV170745134
LULX01043627
346373
Gammaproteobacteria
GAA
Phe
>WENV170744242
LULX01000020
196907
Gammaproteobacteria
GAC
Val
>WENV170744494
LULX01002160
180680
Gammaproteobacteria
GAC
Val
>WENV170744324
LULX01000279
120827
Gammaproteobacteria
GAG
Leu
>WENV170744565
LULX01003434
178164
Gammaproteobacteria
GAT
Ile
>WENV170744253
LULX01000043
481036
Gammaproteobacteria
GCA
Cys
>WENV170744906
LULX01018655
480629
Gammaproteobacteria
GCA
Cys
>WENV170744405
LULX01000959
480516
Gammaproteobacteria
GCA
Cys
>WENV170745087
LULX01037321
480516
Gammaproteobacteria
GCA
Cys
>WENV170744225
LULX01000001
306288
Gammaproteobacteria
GCC
Gly
>WENV170744404
LULX01000959
306288
Gammaproteobacteria
GCC
Gly
>WENV170744226
LULX01000004
29834
Gammaproteobacteria
GCT
Ser
>WENV170744863
LULX01016236
13452
Gammaproteobacteria
GCT
Ser
>WENV170744262
LULX01000060
8609
Gammaproteobacteria
GCT
Ser
>WENV170744513
LULX01002396
20618
Gammaproteobacteria
GGA
Ser
>WENV170744310
LULX01000211
23169
Gammaproteobacteria
GGA
Ser
>WENV170744320
LULX01000255
176663
Gammaproteobacteria
GGG
Pro
>WENV170744256
LULX01000044
178543
Gammaproteobacteria
GGG
Pro
>WENV170744928
LULX01021132
225941
Gammaproteobacteria
GGG
Pro
>WENV170744903
LULX01018297
281791
Gammaproteobacteria
GTG
His
>WENV170744298
LULX01000150
281283
Gammaproteobacteria
GTG
His
>WENV170744845
LULX01015103
178471
Gammaproteobacteria
GTT
Asn
>WENV170744620
LULX01004771
178549
Gammaproteobacteria
GTT
Asn
>WENV170744254
LULX01000043
73504
Gammaproteobacteria
TAA
Leu
>WENV170744314
LULX01000229
283283
Gammaproteobacteria
TAC
Val
>WENV170744315
LULX01000229
283283
Gammaproteobacteria
TAC
Val
>WENV170744727
LULX01008067
282550
Gammaproteobacteria
TAC
Val
>WENV170744453
LULX01001565
338424
Gammaproteobacteria
TAC
Val
>WENV170744455
LULX01001565
338424
Gammaproteobacteria
TAC
Val
>WENV170744290
LULX01000138
118219
Gammaproteobacteria
TAG
Leu
>WENV170744889
LULX01017702
117788
Gammaproteobacteria
TAG
Leu
>WENV170744432
LULX01001219
118640
Gammaproteobacteria
TAG
Leu
>WENV170744278
LULX01000096
178547
Gammaproteobacteria
TCT
Arg
>WENV170744343
LULX01000402
20273
Gammaproteobacteria
TGA
Ser
>WENV170744325
LULX01000287
20273
Gammaproteobacteria
TGA
Ser
>WENV170744323
LULX01000267
20273
Gammaproteobacteria
TGA
Ser
>WENV170744296
LULX01000150
243308
Gammaproteobacteria
TGG
Pro
>WENV170745111
LULX01041072
180681
Gammaproteobacteria
TGG
Pro
>WENV170744435
LULX01001231
281275
Gammaproteobacteria
TGT
Thr
>WENV170744751
LULX01009372
282902
Gammaproteobacteria
TGT
Thr
>WENV170744221
LULX01000001
281282
Gammaproteobacteria
TTC
Glu
>WENV170744232
LULX01000008
281282
Gammaproteobacteria
TTC
Glu
>WENV170744291
LULX01000138
400402
Gammaproteobacteria
TTG
Gln
>WENV170744433
LULX01001219
285547
Gammaproteobacteria
TTG
Gln
>WENV170744646
LULX01005440
285547
Gammaproteobacteria
TTG
Gln
>WENV170744259
LULX01000055
283282
Gammaproteobacteria
TTT
Lys
>WENV170745079
LULX01036555
329164
Gammaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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