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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170747976
LUMD01002276
73123
Gammaproteobacteria
CAA
Leu
>WENV170748026
LUMD01002890
178164
Gammaproteobacteria
GAT
Ile
>WENV170747912
LUMD01001574
281275
Gammaproteobacteria
TGT
Thr
>WENV170748395
LUMD01020196
20273
Gammaproteobacteria
TGA
Ser
>WENV170748013
LUMD01002747
328691
Gammaproteobacteria
GGT
Thr
>WENV170747766
LUMD01000507
20618
Gammaproteobacteria
GGA
Ser
>WENV170747786
LUMD01000594
120827
Gammaproteobacteria
GAG
Leu
>WENV170747815
LUMD01000824
176520
Gammaproteobacteria
CAT
Met
>WENV170747809
LUMD01000783
281282
Gammaproteobacteria
TTC
Glu
>WENV170748243
LUMD01008746
74240
Gammaproteobacteria
CAA
Leu
>WENV170748434
LUMD01023593
329164
Gammaproteobacteria
TTT
Lys
>WENV170748382
LUMD01019160
329164
Gammaproteobacteria
TTT
Lys
>WENV170747839
LUMD01000953
13452
Gammaproteobacteria
GCT
Ser
>WENV170748042
LUMD01003064
176663
Gammaproteobacteria
GGG
Pro
>WENV170747915
LUMD01001593
178471
Gammaproteobacteria
GTT
Asn
>WENV170748005
LUMD01002699
480629
Gammaproteobacteria
GCA
Cys
>WENV170748035
LUMD01002951
480516
Gammaproteobacteria
GCA
Cys
>WENV170747919
LUMD01001609
338424
Gammaproteobacteria
TAC
Val
>WENV170747932
LUMD01001705
243308
Gammaproteobacteria
TGG
Pro
>WENV170748124
LUMD01004968
92638
Gammaproteobacteria
TAA
Leu
>WENV170747852
LUMD01001042
176545
Gammaproteobacteria
CAT
Met
>WENV170747966
LUMD01002070
401684
Gammaproteobacteria
CCT
Arg
>WENV170747840
LUMD01000953
232119
Gammaproteobacteria
ACG
Arg
>WENV170748123
LUMD01004968
481678
Gammaproteobacteria
GCA
Cys
>WENV170748034
LUMD01002951
306288
Gammaproteobacteria
GCC
Gly
>WENV170748156
LUMD01005887
176664
Gammaproteobacteria
CCT
Arg
>WENV170747922
LUMD01001650
346373
Gammaproteobacteria
GAA
Phe
>WENV170747851
LUMD01001040
176544
Gammaproteobacteria
CAT
Met
>WENV170748069
LUMD01003698
176544
Gammaproteobacteria
CAT
Met
>WENV170748060
LUMD01003475
370389
Gammaproteobacteria
GGC
Ala
>WENV170747951
LUMD01001863
180680
Gammaproteobacteria
GAC
Val
>WENV170747947
LUMD01001813
176301
Gammaproteobacteria
GAT
Ile
>WENV170747799
LUMD01000710
180678
Gammaproteobacteria
CCG
Arg
>WENV170747883
LUMD01001325
176665
Gammaproteobacteria
CGG
Pro
>WENV170748071
LUMD01003698
285547
Gammaproteobacteria
TTG
Gln
>WENV170748068
LUMD01003698
285547
Gammaproteobacteria
TTG
Gln
>WENV170747850
LUMD01001040
285547
Gammaproteobacteria
TTG
Gln
>WENV170747913
LUMD01001580
180681
Gammaproteobacteria
TGG
Pro
>WENV170747858
LUMD01001097
180681
Gammaproteobacteria
TGG
Pro
>WENV170748441
LUMD01024070
23169
Gammaproteobacteria
GGA
Ser
>WENV170747934
LUMD01001705
281283
Gammaproteobacteria
GTG
His
>WENV170747857
LUMD01001097
118640
Gammaproteobacteria
TAG
Leu
>WENV170748067
LUMD01003698
118640
Gammaproteobacteria
TAG
Leu
>WENV170748070
LUMD01003698
118640
Gammaproteobacteria
TAG
Leu
>WENV170747798
LUMD01000709
180679
Gammaproteobacteria
CCA
Trp
>WENV170747734
LUMD01000221
180679
Gammaproteobacteria
CCA
Trp
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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