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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170749488
LUMF01000313
59214
Nitrososphaerota
GAG
Leu
>WENV170749495
LUMF01000341
158197
Nitrososphaerota
GAT
Ile
>WENV170749522
LUMF01000677
158197
Nitrososphaerota
GAT
Ile
>WENV170749552
LUMF01001206
158197
Nitrososphaerota
GAT
Ile
>WENV170749581
LUMF01001828
158197
Nitrososphaerota
GAT
Ile
>WENV170749749
LUMF01007295
158197
Nitrososphaerota
GAT
Ile
>WENV170749750
LUMF01007301
158197
Nitrososphaerota
GAT
Ile
>WENV170749832
LUMF01012656
158197
Nitrososphaerota
GAT
Ile
>WENV170749492
LUMF01000328
176915
Nitrososphaerota
TCC
Gly
>WENV170749537
LUMF01000881
176915
Nitrososphaerota
TCC
Gly
>WENV170749895
LUMF01017923
176915
Nitrososphaerota
TCC
Gly
>WENV170749962
LUMF01025900
176915
Nitrososphaerota
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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